Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07- 28] 218 sequences; 30,882,610 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq207 122 8e-23 seq185 116 4e-21 seq142 98.7 9e-16 >seq207 Length=763741 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || || ||||| || || ||||| ||| | Sbjct 54622 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 54681 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || || | |||| |||||||| || || || Sbjct 54682 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 54741 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| ||||| | |||| |||||| | |||||| Sbjct 54742 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 54801 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || |||||||| ||||| || || || |||||||| Sbjct 54802 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 54848 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || ||||| || || || |||||||| | || || Sbjct 54406 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCG 54465 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| |||| | |||||||| || || || |||||||||||| Sbjct 54466 TCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTG 54525 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| || ||||| |||| |||| ||||| | || ||||||| || | Sbjct 54526 TCTTGGATCTTTGACTTGACGTTG-TCGATCGTGTCGGATGATTCCACTTCGAGTGTGAT 54584 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| || || || || ||||| ||||| Sbjct 54585 GGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 54620 >seq185 Length=938846 Score = 116 bits (128), Expect = 4e-21 Identities = 354/535 (66%), Gaps = 33/535 (6%) Strand=Plus/Minus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATT---GAAA 47115 |||| | ||| || ||| | ||||| ||||| || ||||| || | ||| || | Sbjct 320364 TCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGCGTTGCGATGGATTTCTGACA 320305 Query 47116 ACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCT 47175 | ||| || || || ||| ||| | || || || ||| ||| ||||| |||||| Sbjct 320304 A-GAACTCGACATTC--GCCCTCCGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCT 320248 Query 47176 TCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCA 47235 |||| || ||||| || || || | |||| | || | ||| |||| |||| Sbjct 320247 TCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCA 320188 Query 47236 CGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-C 47294 | || |||||||| ||||| | || || ||| ||||||| |||| ||||| || | Sbjct 320187 CATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTC 320128 Query 47295 TACTACAACACTAGAGTC-GATCAA-AAGTTGGACGTGCCCACCGT-CAGCGACATGTTT 47351 | | || | || || || ||| | || | || || ||| | ||| | Sbjct 320127 TGTT------CTCGCATCTGAAGAACAAGCCGAACCAGGCCCTTGTGCAGAG-CATCATC 320075 Query 47352 GCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG--AATCTTTAG 47409 |||| |||||| | || ||| |||||| || | || ||||| || || ||| Sbjct 320074 ACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTC-- 320017 Query 47410 TGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCG 47469 |||| |||||||| | | ||| | | ||||| ||||| |||||||| ||||| || Sbjct 320016 TGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGT 319957 Query 47470 T-----TCAGCTA-AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGA 47523 | || || | ||| ||| | ||| || || || || ||||| || ||| Sbjct 319956 TGGCACTCGGCAACAAG------AAGTTCTACAACGCCACCAACCCCTTCGACTTCATGG 319903 Query 47524 ACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 | ||||||||||| | |||||||||||||| ||||||||||| || ||||| || Sbjct 319902 AGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 319848 >seq142 Length=380217 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | |||||| ||| || | ||| ||||||||| ||||| Sbjct 250778 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 250719 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 || |||||||| || || || || |||||||||||| ||| || ||||| | ||| Sbjct 250718 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 250659 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| |||| || | || ||||| || || || ||||| || Sbjct 250658 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 250600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499504260320