Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07-
28] 218 sequences; 30,882,610 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq185 268 1e-66
seq191 129 7e-25
seq140 114 2e-20
>seq185
Length=938846
Score = 268 bits (296), Expect = 1e-66
Identities = 484/702 (69%), Gaps = 8/702 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || || |||||
Sbjct 870481 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAAATACCC 870422
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||||| | | || ||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 870421 TCCTCAATTGTGAGCAGCGATACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 870362
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 870361 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTCGGCTCG 870302
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695
|| || ||||| || ||| ||||||||||| | ||| || || || || ||||||||
Sbjct 870301 TTGATGATACGGAGGACGTTGAGGCCAGCAAT-GAGGCCGGCGTCCTTGGTTGCTTGTCG 870243
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| ||||| || || || || ||||| ||||| |||| |||| | ||| ||
Sbjct 870242 CTGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAG 870183
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
||||| || ||| | || ||| || || |||| ||| | || ||||| || | |
Sbjct 870182 GTACGACTCTGCGGTCTCACGCATCTTTGTGAGAATCATGGCGGAGATCTCCTCTGGTGT 870123
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875
||||| ||| || || || || || || || | || || ||| ||
Sbjct 870122 GAACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT-GCCG--GCCTTCTC 870066
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
||| ||||| | | | | |||||||| |||| |||| | ||| ||||| |
Sbjct 870065 GATGACCTTGAAGGGAAAGTGCTTCATATCTGCTTGCACCTCTGCGTCTTGGAACTTGCG 870006
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
||||| | |||||||| || || ||||||||| ||||||||||| ||||||||
Sbjct 870005 GCCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGGTTCTT 869946
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
|| || || ||||| ||||| || | || || || |||||| | || || || ||
Sbjct 869945 GGCAGCATCACCGATTAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGT 869889
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
|| || || || ||||| || || || || | ||| || | | ||| || |||||
Sbjct 869888 GCGGTTGCCCTGATCGTTGGCGATGATCTCGATGCGATCATCTCTGAAGATACCCACGCA 869829
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| ||||| || || || || |||||||||||| | | |||
Sbjct 869828 GGAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 869787
Score = 129 bits (142), Expect = 7e-25
Identities = 258/381 (68%), Gaps = 1/381 (0%)
Strand=Plus/Minus
Query 7014 CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072
||| |||| ||||| || ||||| | || ||||| || || ||||| || ||||| ||
Sbjct 871150 CCGCTAAGGATGGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCGTCTGGGTTGATA 871091
Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132
| | | || | || || ||||| || | || || | ||| | || || || |||||
Sbjct 871090 GATCTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATA 871031
Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192
|| || || || ||||| | ||||| || | || || || |||||||| | ||
Sbjct 871030 CGAGTGGAACCGCCGACAAGGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCATCG 870971
Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCA 7252
|| || || || || || ||||| |||||| | |||| || || || ||
Sbjct 870970 CGGAGAGTGCGCTCCACGGGCTCCATGGTGGAACGGAAAAGGTCCTGGCAAAGCTCTTCG 870911
Query 7253 AAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCA 7312
|| || ||||| || ||||| || ||||| || | ||| ||||| | ||| || || ||
Sbjct 870910 AAGCGAGCACGCGTGATGGAAGTGTAGAAGTCGATGCCCTCGTAGAGCGAGTCGATCTCG 870851
Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372
|| | || ||||| | || | || ||||| ||||| || || || || || | |
Sbjct 870850 ATAGAAGTCTGTGCGCTGCTGGAGAGGGTGCGCTTCGCGCGTTCGCATGCTGTCCGCAGA 870791
Query 7373 CGACGAAGGGCACGCGGGTTA 7393
||||||||||| || | ||||
Sbjct 870790 CGACGAAGGGCGCGGGCGTTA 870770
>seq191
Length=93700
Score = 129 bits (142), Expect = 7e-25
Identities = 210/302 (70%), Gaps = 3/302 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| | ||||||||| || || || || ||||| || ||||| |||| |||
Sbjct 41392 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 41451
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | ||||| | | || ||||| || ||||||||||| || || | ||||| |||
Sbjct 41452 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 41511
Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|| || | ||| ||| ||||||| || |||||||| || || |||||
Sbjct 41512 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 41571
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || || || || ||| ||| || || || || | | || || || || ||||||
Sbjct 41572 TCGTTGATGATGCGCAGAACGTTGAGTCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGT 41631
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || |||||| ||||| |||||||| || | ||| || | | ||| ||||| |||
Sbjct 41632 CTCTGGTTATCGTTGAAGTAAGCCGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 41691
Query 7754 AG 7755
||
Sbjct 41692 AG 41693
>seq140
Length=390458
Score = 114 bits (126), Expect = 2e-20
Identities = 241/356 (68%), Gaps = 9/356 (3%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | || || ||||| || || || | || || || | |||
Sbjct 261246 TCGAAGTCCTCACCACCAAGATGGGTGTCCCCGGCCGTTGCCTGAACCTCGAACACACCC 261187
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573
|| | | || | || ||||| || ||||||||||| ||||| | |||||
Sbjct 261186 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCGAGGTCGTAGACAATGA-- 261129
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| ||| || | ||| | |||| ||||| ||||| |||| ||| || || || |||
Sbjct 261128 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 261073
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | | ||| || ||| || || || || || | || || || || ||
Sbjct 261072 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 261013
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| ||||| || ||||| |||| ||||| || | |||
Sbjct 261012 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 260953
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || |||| || ||||| ||| || | ||| ||||| | ||||||
Sbjct 260952 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 260897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131069263120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |