Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07-
28] 218 sequences; 30,882,610 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq185 224 1e-53
seq207 156 6e-33
seq191 147 3e-30
seq140 86.0 8e-12
>seq185
Length=938846
Score = 224 bits (248), Expect = 1e-53
Identities = 470/698 (67%), Gaps = 3/698 (0%)
Strand=Plus/Plus
Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349
||| | | ||| || |||||||| || || || || ||||| || || ||| | | |
Sbjct 869787 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGA 869846
Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409
||||||| | ||||| ||| | || || || || ||||| ||||| || || | |||
Sbjct 869847 GATGATCGCATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 869906
Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469
||||| ||||| | || ||||| | || ||||| || || || ||| || ||||||
Sbjct 869907 GCCTTCACAGACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAAC 869966
Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529
|| || || ||||| ||||| ||||| | || || |||||||| || |
Sbjct 869967 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 870026
Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589
|| |||| ||||| ||| ||| | | | ||| | || | | || | |||||
Sbjct 870027 GTGCAAGCAGATATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCA 870083
Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649
| || || || || | || ||| |||| || || | || || || || || |
Sbjct 870084 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 870143
Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709
||| | | | |||||| ||||| || || || | | | ||| || || || |
Sbjct 870144 ATGATTCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 870203
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| || || || || || || || |||| || || || ||||| || || ||||||||
Sbjct 870204 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCC 870263
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| ||||| || || ||| || | || ||||| || || || || || || |||
Sbjct 870264 GGCCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATT 870323
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
|| || ||||| |||||||| | || | || ||||| | ||||| ||||| |||
Sbjct 870324 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 870383
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
|||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| |
Sbjct 870384 GGTGGTACCTTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCC 870443
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| ||||| ||||| | |||||||| || |||||
Sbjct 870444 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGA 870481
>seq207
Length=763741
Score = 156 bits (172), Expect = 6e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || || |||||||||||||||||||| ||||| ||||| || | || |
Sbjct 55052 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 54993
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || |||||||||||||||||||| || |||||||| | ||||| || || ||
Sbjct 54992 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 54933
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| || || || || ||||| | || |||||| |||| |||||| ||||| ||
Sbjct 54932 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 54873
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | ||||| ||||||
Sbjct 54872 CTCGTCCTCCGTCTTCGTGGTGGT 54849
Score = 150 bits (166), Expect = 2e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || || || || || || |||||||||||||| ||||
Sbjct 54853 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 54794
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| ||||| ||||| || |||| | ||||| || || ||||| || || ||||| |
Sbjct 54793 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 54734
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || |||||||| || || ||||| || ||||| ||||| || | || |
Sbjct 54733 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACT 54674
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || || || || ||||| ||| | || || | || || ||||||
Sbjct 54673 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 54621
>seq191
Length=93700
Score = 147 bits (162), Expect = 3e-30
Identities = 196/272 (72%), Gaps = 3/272 (1%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || |||||||||| ||| || |||| || || |||||||||| ||| ||
Sbjct 41663 ACCGTCCCGGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 41604
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| ||| | || ||||| || ||||| || ||||| || || ||||||
Sbjct 41603 GCCGGACTCAACGTTCTGCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 41544
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| ||| | || ||| || | |||| ||||| |||||||||
Sbjct 41543 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 41484
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| ||||| | ||| | || ||| | ||| || |||||||| |||
Sbjct 41483 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 41424
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| || ||| | |||||| | ||||||||
Sbjct 41423 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 41392
Score = 107 bits (118), Expect = 3e-18
Identities = 251/375 (67%), Gaps = 8/375 (2%)
Strand=Plus/Minus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118
||||| ||||| || | || || || || |||||||| |||||||| || | ||||
Sbjct 41212 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 41155
Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178
||||||| | | || || ||||| | || || || || ||| | || | || |
Sbjct 41154 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 41095
Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236
||||||| ||||| || || | ||| | | || | || | || | || ||
Sbjct 41094 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 41037
Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296
|| || || || |||||| || || ||| |||||||| || || || |||||
Sbjct 41036 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATCGTGCTTGT 40977
Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356
|| || || || |||||||| ||||| || || | || || ||||||||| ||
Sbjct 40976 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 40917
Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416
| | | || | |||||||| ||||| || || || || ||||| |||||||||||
Sbjct 40916 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGTGCCGCCGTTCAGGC 40857
Query 196417 TGCTATTCTCTCAGG 196431
| ||| ||||| ||
Sbjct 40856 CGGTATCCTCTCTGG 40842
>seq140
Length=390458
Score = 86.0 bits (94), Expect = 8e-12
Identities = 220/331 (66%), Gaps = 13/331 (4%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||| || || || | | | || ||| || | | ||||| || ||
Sbjct 260924 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 260983
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || | || || || || |||||||||| | || ||
Sbjct 260984 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 261043
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| || | | |||| ||||| || || || || | || || || ||
Sbjct 261044 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 261103
Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896
||||||| ||||||| || |||| | ||| ||| || |||||||||||||
Sbjct 261104 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTCGGTGGTGGTA 261155
Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956
| || |||||||| | | | | | || ||| | ||||| || |||| || || |
Sbjct 261156 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 261215
Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| || || ||||| |||||||| || |||||
Sbjct 261216 GGGACACCCATCTTGGTGGTGAGGACTTCGA 261246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657860607324960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |