Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07-
28] 218 sequences; 30,882,610 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq133 196 6e-45
seq185 86.0 8e-12
seq139 82.4 1e-10
>seq133
Length=486135
Score = 196 bits (216), Expect = 6e-45
Identities = 885/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| |||||||||| || ||||| || ||| |||| ||| || | ||| ||
Sbjct 413443 GTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGA 413502
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|||||||||||| || || | | ||| ||| || | ||| | || ||| |
Sbjct 413503 GGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCC 413562
Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATGTCAAACTG 110883
|||||| | ||||||| || || | ||| | ||| |||||||||| ||||
Sbjct 413563 CTTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTG 413619
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941
||| | || || || | ||||| || | || || || | ||| | ||||| |
Sbjct 413620 GAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCA 413677
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | || || ||||| || | || ||||| ||||| ||||| || | |||
Sbjct 413678 GCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTA 413737
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| ||||||||| ||| ||| || |||| |||| | || |||| || |||
Sbjct 413738 AGCTCCTTGGCCTCAGGTGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGA 413797
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 111120
|| | ||||| | |||||| |||| ||| || | || |||||| || ||| ||
Sbjct 413798 CCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTAC 413856
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|| || | || | || ||| ||| || || || || | || |||| ||
Sbjct 413857 TGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTC 413916
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240
|||||||| | | |||||| |||| | ||| || | || || || |
Sbjct 413917 GTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAG 413976
Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300
|| |||| |||||| ||||| |||||| | | | |||||| | || || || ||
Sbjct 413977 CGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCA 414036
Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360
|| || || ||||| || || || | |||||| || || ||||| |||| || ||
Sbjct 414037 CAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTC 414096
Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420
|||||| || ||| | || || || ||||| ||||| | | ||||||||| | ||| |
Sbjct 414097 CTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATAT 414156
Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGG 111479
| || | || | | ||||| | ||| | | ||| || ||| ||
Sbjct 414157 TTTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 414215
Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGA 111538
| | ||||| ||||| | || || ||||| || || || || || || | |||
Sbjct 414216 CCTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGA 414274
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
| ||| || | || || |||| ||| || || || |||||||| || | |
Sbjct 414275 GTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAG 414334
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
|| | ||| | ||| | ||||| | || ||||| || | || | ||||| |
Sbjct 414335 AACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGC 414394
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 111712
|||| || || ||||| |||||||| |||| || | || || | |||||
Sbjct 414395 ATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTG 414451
Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772
||| | || | || || || || ||| |||| | || || |||||||| | || |||
Sbjct 414452 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 414511
Query 111773 TCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGT 111830
| ||| || ||||| || | ||| | ||| | |||| || | | || | |
Sbjct 414512 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACAT 414569
Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890
| | |||||||| ||||| ||| ||||| ||||| | | || || | ||||
Sbjct 414570 GAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 414629
Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950
|||| | || ||| ||||| |||| | | |||||| | | ||||| ||
Sbjct 414630 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTG 414689
Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTG 112009
| ||||||||| |||| || ||||| | || || |||| ||| | ||||| | |
Sbjct 414690 GGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAG 414748
Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069
| ||||||||| | | | |||||||||||||| || ||||||| || || ||||||
Sbjct 414749 TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATG 414808
Query 112070 AACAT 112074
| |||
Sbjct 414809 ATCAT 414813
>seq185
Length=938846
Score = 86.0 bits (94), Expect = 8e-12
Identities = 135/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|||||||| ||||| || || || || ||||| || || | ||||||||| || |||
Sbjct 320154 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 320213
Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795
|||| ||| | ||||| ||| || || || ||||||||||||||||| || |||||
Sbjct 320214 TTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 320272
Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTGCCCATT 122854
|||| || || |||||| | |||| ||| || || |||| || ||||| |
Sbjct 320273 TGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGT 320331
Query 122855 TCGCCTTC 122862
||||||
Sbjct 320332 CAGCCTTC 320339
>seq139
Length=404283
Score = 82.4 bits (90), Expect = 1e-10
Identities = 147/208 (71%), Gaps = 10/208 (5%)
Strand=Plus/Minus
Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576
||||||||||||||||| ||||| | ||| ||| ||||| ||||| ||| | |||||
Sbjct 324132 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 324073
Query 182577 CG-AAG--TTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTG 182633
|| ||| || || |||| |||||| || ||||| ||||| | | |||||||
Sbjct 324072 CGCAAGCCTTTAG---TATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTG 324016
Query 182634 A-GATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCT 182691
| | || |||| ||| ||| || || ||| | | ||||| || || |||||
Sbjct 324015 ATGTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGA 323958
Query 182692 TACATTTACCGCGAAGTGGGAACACACC 182719
| ||||| ||||||||||| |||||
Sbjct 323957 GAATCTTACCCCGAAGTGGGAAGACACC 323930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030288612800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |