Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07-
28] 218 sequences; 30,882,610 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq133 140 5e-28
seq185 131 2e-25
>seq133
Length=486135
Score = 140 bits (154), Expect = 5e-28
Identities = 462/715 (65%), Gaps = 10/715 (1%)
Strand=Plus/Plus
Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582
|| || || || ||||||| || |||||| ||||| || || ||||||| | |||
Sbjct 414221 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAA 414280
Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642
|| | | | || || | |||||||||||| || ||||| ||||| || | |
Sbjct 414281 GTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAA 414340
Query 76643 TCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702
|| || | | | |||||| ||||| ||||| ||| || | ||||| ||| |
Sbjct 414341 TCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACG 414400
Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762
|| | |||||| || || || || || || | | |||| || || || || || |||||
Sbjct 414401 TCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGG 414460
Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822
|| | || | |||||||| ||||| |||| | |||||| | || ||||| |||||
Sbjct 414461 TCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 414520
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| ||||| || ||| || || || | || || || | || || ||
Sbjct 414521 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATA 414580
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || || | || ||||| | ||||| || | || || ||||| || || ||
Sbjct 414581 CCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATG 414640
Query 76943 CTATCATCCATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|| |||||| ||||| |||||| | ||||| || || || ||
Sbjct 414641 CTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTGTGGGGTACC 414696
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATG 77057
||| | || | ||| || || ||||| ||||| | || || | |||| |||||||
Sbjct 414697 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTGTATG 414755
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
| ||||| ||||||| || || |||||| || ||||| |||||||| | ||| |
Sbjct 414756 TCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCT 414815
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
| || |||| || || ||| | ||| | | | ||||||| |||| ||| |
Sbjct 414816 GTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCT 414875
Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
| || || || || | ||| ||||| | || || | ||| |||| || ||
Sbjct 414876 TGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAG 414930
>seq185
Length=938846
Score = 131 bits (144), Expect = 2e-25
Identities = 343/517 (66%), Gaps = 10/517 (2%)
Strand=Plus/Plus
Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731
||||| || ||||||||||| | ||| || ||||| || || ||||| || ||||| ||
Sbjct 320175 TCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA 320234
Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791
||||||||||| ||||| || || || || || || ||||| | || | || |
Sbjct 320235 AAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAAT 320294
Query 46792 CTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848
| | | || | | ||||| | ||||| |||||||| | | || ||
Sbjct 320295 GTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGG 320354
Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908
|| | || || ||||| || || | || | | || | | ||||||||
Sbjct 320355 ATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCG 320414
Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968
|| | ||| ||| | || || || ||||| || || ||||| || ||||| ||
Sbjct 320415 ATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 320474
Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAA-TTCTCATTCAC 47027
|||| ||| || | ||||| ||||| | | || || || ||| | ||||| || ||
Sbjct 320475 CATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGAC 320533
Query 47028 TATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG-- 47085
|| ||||| || || || ||||| | || ||| || || || ||| |||
Sbjct 320534 AATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTC 320593
Query 47086 GT--AGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 47143
|| |||| | || |||||||| | || ||| || || | ||| | || ||||||||||
Sbjct 320594 GTTGAGTC-GCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCC 320652
Query 47144 AGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180
||||||| ||||| || ||||| ||||| | ||||||
Sbjct 320653 AGAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 320689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932457253760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |