Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq163 93.3 4e-14 >seq163 Length=1072245 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||| |||||| || ||||||||||| | || ||| || |||||| Sbjct 360658 CACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCG-AAAGTGTCCGGCCGTCCT 360716 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | |||||||| ||| || | || | ||||||||| ||| || | | |||||||| Sbjct 360717 CAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTT 360776 Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 || || ||||| | | || || || |||| || ||| |||| ||| ||||| Sbjct 360777 GGATCTTTGACTTGACGTTGTCG--ATCGTGTCGGATGATTCCACTTCGAGTGTGATGGT 360834 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || |||||||| || || || ||||| ||||| Sbjct 360835 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 360867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250306684174