Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq163 93.3 4e-14 >seq163 Length=1072245 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||| ||||| || || | ||| || ||| || ||| |||||| Sbjct 360886 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 360945 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || |||| || | | ||||| || || || ||||| || ||||| | Sbjct 360946 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 361005 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTT 94975 || || | |||||| | ||| ||||| || ||| ||||| || | |||||||| Sbjct 361006 GATCTTCGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCGAGGGTGATGGTC 361063 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || || ||||||||||| Sbjct 361064 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 361095 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850 |||| ||||||||||| ||| || ||||| || | ||| |||| | | ||||| | Sbjct 360653 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAAT--CCGAAAGTGTCCGGC 360710 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||| ||||| || ||| | ||||| | | ||||| || || || || || || | Sbjct 360711 CGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCT 360770 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || |||| ||||||| | ||| ||||| | || || || | |||| Sbjct 360771 TGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGA 360830 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || || || || || || ||||| Sbjct 360831 TGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 360867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290224966640