Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07-
28] 174 sequences; 30,259,387 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq103 309 8e-79
seq153 89.7 1e-12
seq98 89.7 1e-12
seq142 87.8 5e-12
>seq103
Length=313272
Score = 309 bits (342), Expect = 8e-79
Identities = 1158/1795 (65%), Gaps = 52/1795 (3%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449
||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| ||
Sbjct 240048 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 239990
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| ||||| || ||| | |||||||| ||| | || || ||| | || |||| ||
Sbjct 239989 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 239930
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564
|||||||| ||||| || ||| || |||| ||| ||||| || || |||||
Sbjct 239929 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 239875
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
||| | | || |||||| || | | | ||| | | || ||||| | | |||
Sbjct 239874 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 239815
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || ||| || ||||||| || || || |||| ||||| | || ||||||
Sbjct 239814 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 239755
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743
|| || ||||| |||||| | | ||||| | | || |||| | |||||| |
Sbjct 239754 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 239696
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||||| || || || || || || || ||||| || || | | |||| |||||
Sbjct 239695 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 239636
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| ||||| ||||||||||| ||||| ||| || ||||| || || || |||||
Sbjct 239635 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 239576
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||||| || | | |||| | || || || || ||| ||||| || ||| |
Sbjct 239575 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 239516
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| || ||| ||||||| || || ||| || | || | |||||| |||| || ||
Sbjct 239515 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 239456
Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
||| | | |||| | || | ||||| ||||||| || ||||| || ||||| |
Sbjct 239455 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 239397
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||||||| | | || ||||| ||||| || || |||| ||| |||
Sbjct 239396 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 239337
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| ||| || ||||| |||||| ||| || | || |||||| ||||| || ||||
Sbjct 239336 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 239277
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| | || ||||||| || | |||||||||| ||| ||| || | ||||| || |
Sbjct 239276 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 239217
Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
||| ||||| || | || || ||||| || || ||| | ||||| || ||| |
Sbjct 239216 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 239160
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331
| || || || || || ||| | || || || | | || | || |||
Sbjct 239159 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 239102
Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391
||||||| | || | ||| | || || ||| | | || | || || |||||
Sbjct 239101 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 239042
Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450
||||| | || || || ||| | || || || ||| | | || | || || || |
Sbjct 239041 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 238983
Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510
| |||||||||||||| | || || ||||| | || || ||| ||| |||| |
Sbjct 238982 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 238923
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| |||||||| || | || |||| |||| ||||| || |||||| ||| ||
Sbjct 238922 ACTCGCCTGAGGCCAAGGAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTC 238863
Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630
| ||||| || || | || | | || ||| || || || || |
Sbjct 238862 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 238803
Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690
| | |||||||| | |||||| || | ||| || || | | || |||
Sbjct 238802 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 238743
Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741
|||||| ||| || ||| | |||| |||| ||| |||||||| |
Sbjct 238742 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 238689
Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801
||||| ||||| ||||| || || || || | |||||| | || ||||||||||
Sbjct 238688 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 238632
Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861
|||| || | |||||||| |||| || || || || | | || || || | ||| |
Sbjct 238631 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 238572
Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921
| || | || | |||||||| |||||| || || ||| || | ||||||||
Sbjct 238571 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 238512
Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981
|| |||||||| | ||||| || | ||| ||| || ||||||| || || |
Sbjct 238511 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 238452
Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041
|| | | ||||| ||||| ||||| || | ||| | || | | ||||| || |
Sbjct 238451 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 238392
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
| || |||||||||||| ||| ||| || ||| | |||| ||||||||
Sbjct 238391 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCATATGAAGGAGCCAACCA 238332
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| |||| |||||| ||| || ||||| |||||| ||||| ||
Sbjct 238331 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 238277
>seq153
Length=1106928
Score = 89.7 bits (98), Expect = 1e-12
Identities = 146/207 (71%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496
||||| || |||||| || |||||| |||| |||| ||||||| |||||
Sbjct 841699 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 841757
Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556
||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| ||
Sbjct 841758 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 841817
Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616
||| || ||||||| | ||| | || || || || || || ||| | || ||| ||
Sbjct 841818 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 841877
Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643
|||||| | || || || || || ||
Sbjct 841878 TGAGGGCATGCACACAGACTTCGCCTG 841904
>seq98
Length=1626709
Score = 89.7 bits (98), Expect = 1e-12
Identities = 191/281 (68%), Gaps = 6/281 (2%)
Strand=Plus/Minus
Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474
|||| || | || ||||| || || || || || || | ||||| || || || || |
Sbjct 114053 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 113994
Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532
|||| ||| || ||| || ||||| || || ||||| ||||||||||| ||||||||
Sbjct 113993 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 113936
Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591
|| || ||||||||| |||||| || || ||| || ||| || | ||
Sbjct 113935 AGCCGAATACAAAACCTGCCACGACGACTACACCGGCCAAGGAGTCGACCAACTAGCCGA 113876
Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651
| || || | || | ||||| ||||| | |||||| || || | ||||| ||||
Sbjct 113875 A-GTAATCCACAAACTCAAGAATAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 113817
Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692
|||| | | | |||||||| || ||||| || |||
Sbjct 113816 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 113776
>seq142
Length=1160126
Score = 87.8 bits (96), Expect = 5e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930
|||||| | || | ||| || ||| ||| ||||| ||||| || |||| |||
Sbjct 641734 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 641793
Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990
||||||||||||| | | |||||| || || |||||||||| |||||||||||| ||
Sbjct 641794 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 641853
Query 65991 CATTGCAGAAAAGAAAAACTC 66011
||| || ||||| |||||
Sbjct 641854 CATGGCGTGGAAGAAGAACTC 641874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350694336068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |