Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07-
28] 174 sequences; 30,259,387 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq103 163 3e-35
seq163 134 1e-26
seq109 107 2e-18
seq86 105 6e-18
>seq103
Length=313272
Score = 163 bits (180), Expect = 3e-35
Identities = 916/1447 (63%), Gaps = 37/1447 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| |||||||||||||| | || | ||| ||| | ||
Sbjct 238568 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 238627
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || |||||||| ||||| ||| || | ||||| || || ||||| ||| ||
Sbjct 238628 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 238687
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| ||||||| ||| | |||| || | |||| |||||
Sbjct 238688 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 238747
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296
|| || || || | |||||||||||||||| | ||||| || | | ||
Sbjct 238748 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 238806
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
|||| | | | |||| | || | || | || |||||||| ||||| ||||
Sbjct 238807 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 238865
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
| | ||| || ||||| ||| || | || ||| | | || ||| |||
Sbjct 238866 CAGCATGATACATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGA 238925
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| |||||||| || | || ||||| || || || | | || | || ||||| |
Sbjct 238926 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 238985
Query 145476 GATGTTTCATGTTGCTCAT-----CCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530
| || | ||||||| | |||| ||| | ||| | | ||| |||||
Sbjct 238986 GGTGGCGGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTA-GTTGAT----CTCGAT 239040
Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590
| || |||| ||| || || || || || | | | | || | ||||||||
Sbjct 239041 GGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA 239100
Query 145591 CCGAGCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647
| ||||| || | | | || || | | || | ||| |||| ||| || ||
Sbjct 239101 ---AACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGAC 239157
Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707
|| ||| || | | ||| | | |||||| | ||||||||| | |||||
Sbjct 239158 AGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGAT 239217
Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
||| || ||||| | |||||| || || | |||| ||||||||||| || ||| | ||
Sbjct 239218 GGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGG 239277
Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACC 145825
| ||| ||||| ||||| ||| | ||| | || | | | ||| ||||| |||
Sbjct 239278 TGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACC 239335
Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885
|| || ||| ||| || || | ||| ||||||| ||| || ||||
Sbjct 239336 GTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCG 239395
Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945
|| ||| ||||| || || || | |||||| |||||||| | ||| ||||||
Sbjct 239396 TAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGT 239455
Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005
| ||| |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| |
Sbjct 239456 TCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACG 239514
Query 146006 CAATCCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCC 146063
| | || ||||| ||| || | | | || || || ||| || ||||
Sbjct 239515 AACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCATGCC 239573
Query 146064 ACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGAC 146120
|||| |||| |||| ||| | || ||| || |||||||||||||| |||| ||
Sbjct 239574 ACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAAC 239633
Query 146121 GTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAG 146180
| | |||||||| |||| || | ||| || | | ||| ||| | |||||| ||
Sbjct 239634 GAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGC 239693
Query 146181 AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGT 146240
| || | ||| || | | | ||||||| | || | |||||| |||
Sbjct 239694 CGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGT 239753
Query 146241 ACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCT 146298
|||||| || ||| || ||| || |||||||| || |||||||| || ||
Sbjct 239754 TCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCT 239813
Query 146299 TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAA 146358
|| ||| | | || ||||| || | ||||||| || || || || ||| |
Sbjct 239814 TC--ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAG 239871
Query 146359 CGTCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGT 146417
|| || || || || || | ||| | ||| || || || || ||
Sbjct 239872 TGTTGGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTG 239930
Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477
||| |||||| || ||||||||||| | ||| || ||||||| ||| ||||| || | ||
Sbjct 239931 CTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCT 239990
Query 146478 CCGCCAC 146484
| || ||
Sbjct 239991 CGGCAAC 239997
>seq163
Length=1072245
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| |
Sbjct 360869 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 360928
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||||||||| | || | ||||||||||| || |||
Sbjct 360929 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 360988
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || ||| |||||||||
Sbjct 360989 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 361048
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| ||||| || ||||| ||||||||
Sbjct 361049 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 361095
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||||||||| || || | || |||||||| || |||||||||||
Sbjct 360640 GCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 360699
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || |||||| ||||||||||| ||| |||| | ||||||||||||||| ||
Sbjct 360700 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 360759
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || |||| || || |
Sbjct 360760 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 360819
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || ||||| || || || |||||||| |||||
Sbjct 360820 TTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 360867
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | || |||||| ||||||||||| ||| |
Sbjct 361097 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 361156
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||||||| | || || || |||||||| || ||
Sbjct 361157 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 361216
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||| | | || | ||||||| ||||| |
Sbjct 361217 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTATCGGACGACTCAACC 361276
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||||| ||| || |||||
Sbjct 361277 TCGAGGGTAATGGTCTTGCCGGT 361299
>seq109
Length=1586495
Score = 107 bits (118), Expect = 2e-18
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101
|| |||| || |||||||| ||| | |||||| ||||| | |||||| || |||
Sbjct 391883 ACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 391942
Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161
|||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| |
Sbjct 391943 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 392002
Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221
|| | || ||| | ||||||| |||| || | ||| || || || || || ||||
Sbjct 392003 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 392062
Query 131222 CGAA 131225
||||
Sbjct 392063 CGAA 392066
>seq86
Length=502408
Score = 105 bits (116), Expect = 6e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||| |||||| ||||||||||| |||
Sbjct 229609 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 229668
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| ||
Sbjct 229669 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 229728
Query 131128 ATTCCTTCTTTGTCGGTG 131145
||||| || ||||| |||
Sbjct 229729 ATTCCCTCCTTGTCTGTG 229746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011773372160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |