Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq109 111 3e-19 seq87 98.7 2e-15 >seq109 Length=1586495 Score = 111 bits (122), Expect = 3e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437 |||||||||| ||||| ||||| ||| || | ||| |||||||||| | || Sbjct 172197 GCATATGGTGCAAAGATCCTGCTCAACCAGACACATCTCCGACTCAAGCGTGGTCAGCGT 172138 Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497 |||||||| |||||||||| ||| | || |||| ||| || ||||||||||| ||| Sbjct 172137 TATGGTCTTCTCGGTCCCAACGGATCTGGCAAGACCACGCTCATGCGCGCCATCAACAAC 172078 Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556 | ||| | || ||||| ||||| ||| ||||| | ||| ||||| || |||||||| Sbjct 172077 GAGCAGGTCGAGGGATTCCCTAA-GCAGGACGAGGTTAAGACCGTGTACGTCGAGCACGA 172019 Query 279557 CATCGACTCC 279566 | | || ||| Sbjct 172018 CTTGGATTCC 172009 Score = 102 bits (112), Expect = 2e-16 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || || |||| |||||||| || |||||||| || |||||||| || |||| |||||| Sbjct 171414 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 171355 Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | || || |||| || ||| | |||| ||||| || || || Sbjct 171354 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTATACCAGCACGAGAACATCCGTATCGC 171296 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||||||| |||||||| |||| || || | ||| || | | Sbjct 171295 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 171236 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 |||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 171235 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 171185 Score = 96.9 bits (106), Expect = 7e-15 Identities = 123/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||||||| | ||| | ||||||| ||||| |||||||| || | Sbjct 170858 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGCATGAAGGGTCTTTCCGGCG 170799 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | || ||| ||| |||| |||||| | |||||| |||||||| Sbjct 170798 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 170740 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 || |||||||| ||||||||||| ||||| || ||||| ||||| Sbjct 170739 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 170693 >seq87 Length=2195358 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 ||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| | Sbjct 1242077 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 1242018 Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 || || || || ||| ||||||||| |||| || | ||| || |||| Sbjct 1242017 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 1241958 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 |||| || | ||| | |||| || || || | ||| || ||||| ||| ||||||||| Sbjct 1241957 ACGCGCTCGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 1241898 Query 280354 GCTATGC 280360 | ||||| Sbjct 1241897 GATATGC 1241891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834508566334