Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07-
28] 174 sequences; 30,259,387 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq109 111 3e-19
seq87 98.7 2e-15
>seq109
Length=1586495
Score = 111 bits (122), Expect = 3e-19
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437
|||||||||| ||||| ||||| ||| || | ||| |||||||||| | ||
Sbjct 172197 GCATATGGTGCAAAGATCCTGCTCAACCAGACACATCTCCGACTCAAGCGTGGTCAGCGT 172138
Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497
|||||||| |||||||||| ||| | || |||| ||| || ||||||||||| |||
Sbjct 172137 TATGGTCTTCTCGGTCCCAACGGATCTGGCAAGACCACGCTCATGCGCGCCATCAACAAC 172078
Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556
| ||| | || ||||| ||||| ||| ||||| | ||| ||||| || ||||||||
Sbjct 172077 GAGCAGGTCGAGGGATTCCCTAA-GCAGGACGAGGTTAAGACCGTGTACGTCGAGCACGA 172019
Query 279557 CATCGACTCC 279566
| | || |||
Sbjct 172018 CTTGGATTCC 172009
Score = 102 bits (112), Expect = 2e-16
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| || |||||||| || |||||||| || |||| ||||||
Sbjct 171414 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 171355
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | || || |||| || ||| | |||| ||||| || || ||
Sbjct 171354 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTATACCAGCACGAGAACATCCGTATCGC 171296
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||||| |||| || || | ||| || | |
Sbjct 171295 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 171236
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 171235 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 171185
Score = 96.9 bits (106), Expect = 7e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| | ||||||| ||||| |||||||| || |
Sbjct 170858 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGCATGAAGGGTCTTTCCGGCG 170799
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | || ||| ||| |||| |||||| | |||||| ||||||||
Sbjct 170798 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 170740
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|| |||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 170739 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 170693
>seq87
Length=2195358
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| |
Sbjct 1242077 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 1242018
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| || || || ||| ||||||||| |||| || | ||| || ||||
Sbjct 1242017 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 1241958
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| || | ||| | |||| || || || | ||| || ||||| ||| |||||||||
Sbjct 1241957 ACGCGCTCGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 1241898
Query 280354 GCTATGC 280360
| |||||
Sbjct 1241897 GATATGC 1241891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834508566334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |