Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq163 206 5e-48 seq153 141 2e-28 seq109 125 1e-23 >seq163 Length=1072245 Score = 206 bits (228), Expect = 5e-48 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| |||||||| || |||||||| || |||||||| ||||| || Sbjct 360641 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 360700 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||||| || || || | |||||| |||||||| ||||| | || ||||| ||||| Sbjct 360701 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 360760 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| ||| Sbjct 360761 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 360820 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||| ||||||||||| || ||||| Sbjct 360821 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 360867 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || || ||||| |||||||| || ||||| Sbjct 360869 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 360928 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| ||||| Sbjct 360929 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 360988 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 360989 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 361047 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| ||||||||||| |||||||| Sbjct 361048 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 361095 Score = 100 bits (110), Expect = 5e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || ||| ||| || || ||||| || ||||| Sbjct 361097 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 361156 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | ||| ||||| |||||| Sbjct 361157 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 361216 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||| || |||||||| || | || || || Sbjct 361217 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTATCGGACGACTCAACC 361276 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||| ||||| || || |||| Sbjct 361277 TCGAGGGTAATGGTCTTGCCGGTGA 361301 >seq153 Length=1106928 Score = 141 bits (156), Expect = 2e-28 Identities = 300/441 (68%), Gaps = 10/441 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || |||||||||||||| || || |||||||||||||| |||||| | Sbjct 842208 CATGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 842149 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC---GCCAAACTGCTTGGGGTA 10051 || |||||| |||||||||||| |||||||| ||| | |||| ||| || Sbjct 842148 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTT---GTT 842092 Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111 |||||||| | | ||| || || ||||| || ||||| || ||| ||| | | Sbjct 842091 GCCGAGTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 842032 Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||| || | | ||| || | ||||| | ||| |||| ||| | | ||| Sbjct 842031 GTTCATCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGAC 841972 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231 || || || |||||||| || | | | || | ||||||||| || | ||| | Sbjct 841971 GGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAA 841912 Query 10232 CAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||| || | || | ||| ||| | |||||| || ||| ||||| |||||| || | Sbjct 841911 CAGAAGGCAGGCGAAGT-CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 841853 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCG 10349 | || |||| |||||| || || || ||||||||| || || ||| || || || Sbjct 841852 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA-AAAGATCCA 841794 Query 10350 GAGAACAGAAGACCCTCCACG 10370 ||||| | | |||||| ||| Sbjct 841793 GAGAAGAAGATACCCTCAACG 841773 >seq109 Length=1586495 Score = 125 bits (138), Expect = 1e-23 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325 || || | || |||||||| || |||||||| || | ||||| || |||||||| || | Sbjct 391880 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 391939 Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385 |||| || | | || ||||| ||||| || || |||||||| || ||||| ||||| Sbjct 391940 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 391999 Query 68386 CGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 | ||||||||||| ||| || || || || | |||||||| || || ||||||||| Sbjct 392000 CATTGTCGATGGTGTC-GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 392058 Query 68445 TTGACGAA 68452 || ||||| Sbjct 392059 TTTACGAA 392066 Score = 89.7 bits (98), Expect = 9e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 224979 ACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAG 225038 |||||||||||||||| | | |||||| | || || |||| || || || ||||| Sbjct 171219 ACCGCCACTGGATGTATTCGGACGGGGTCTTCTCGAGATGGTGGTCGATGTGCGCGAAAG 171278 Query 225039 CATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC- 225097 | ||||| | ||| || || || ||||| |||| | || ||| |||| Sbjct 171279 CGTGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTATACGTCGCCGGCAGTCG 171338 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || || | ||| || || ||||| |||| ||| |||| |||||| |||||||| || ||| Sbjct 171339 GGATGAG-CTCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCGGCACCATTTGGCCCA 171397 Query 225158 ATCACGCCAATCCGGGAT 225175 || ||| |||| || ||| Sbjct 171398 ATGACGGCAATACGAGAT 171415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620395471280