Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq153 271 8e-68 seq163 132 5e-26 seq109 113 5e-20 seq86 84.2 2e-11 >seq153 Length=1106928 Score = 271 bits (300), Expect = 8e-68 Identities = 582/859 (68%), Gaps = 17/859 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || ||||| || ||||| || || || || || || | Sbjct 842208 CATGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 842149 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCC 132707 || |||||| | ||| || || |||||||||| | ||||||| | |||| |||| Sbjct 842148 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCC 842089 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || | | || || || | ||||| ||||| || |||||||| |||||| | Sbjct 842088 GAGT--GCCAAC-AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 842032 Query 132768 ATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | ||||| || ||| || || || || || | || |||||||| | || Sbjct 842031 GTTCATCCCCAGAAGCTTGCAT-GGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGA 841973 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||||| ||| | || | ||| | ||||| | | || |||| || Sbjct 841972 CGGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA 841913 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| | ||| || ||||| |||| |||||| || | ||| ||||| ||||| || Sbjct 841912 ACAGAAGGCAGGCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 841853 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | || | |||| |||||| || ||||| || ||||| || || || || ||| || | Sbjct 841852 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAG 841793 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||| ||||| || || || | || || | |||| || | | | Sbjct 841792 AGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCT 841733 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126 || | ||||| |||| |||||| || ||||| || ||| || || | |||| Sbjct 841732 TGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGA 841673 Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGT 133184 |||| || |||| | | ||| || | || ||| | ||| || |||||||| Sbjct 841672 TGGCATTGAACAG--GTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAG 841615 Query 133185 CGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGC 133244 ||||| | || ||||| | ||||||||| ||| || |||||||| ||||| || || Sbjct 841614 GGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGC 841555 Query 133245 CTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303 ||| | |||||| || |||| ||| |||||||| || || |||||||| ||||| | Sbjct 841554 CTCCGGGATCTGCACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCAT 841496 Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363 || |||||||| || || || ||||| |||||| || |||| |||||| | | Sbjct 841495 CGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC 841436 Query 133364 GCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 ||| ||||||| | ||||| ||||| || | |||||| | ||||| || || | Sbjct 841435 GCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGG 841376 Query 133421 CCTCGGCTTTTTTGTACAT 133439 ||||||| ||||||||||| Sbjct 841375 CCTCGGCCTTTTTGTACAT 841357 >seq163 Length=1072245 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| ||| | Sbjct 361095 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 361036 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || || | ||||| Sbjct 361035 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 360976 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || ||||| ||||| || || | || || || |||||||||| Sbjct 360975 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 360916 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||| |||| || || |||||||| ||| Sbjct 360915 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGT 360880 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| |||||||| |||| || || | || Sbjct 360867 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 360808 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || ||| |||| ||||| ||||| || || | ||||| Sbjct 360807 GACACGATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCA 360749 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| || || || || ||||| Sbjct 360748 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 360689 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| | || ||||| |||||||||||| | | || |||| Sbjct 360688 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCC 360639 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||| ||| |||| || ||| | |||| | | | | || | | || Sbjct 361301 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGATACCATCGACAATG--TGAA 361244 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || || || ||||| | ||||| || || | |||| ||| || Sbjct 361243 GAGCAAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGG 361184 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGC 38442 ||| ||||| || |||| |||||||| |||||||||||| || ||||| ||| || | Sbjct 361183 CAAGCAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGC-ACTC 361125 Query 38443 TGCATTTGGTGCTGCGT 38459 | ||| | || || ||| Sbjct 361124 TCCATCTCGTCCTCCGT 361108 >seq109 Length=1586495 Score = 113 bits (124), Expect = 5e-20 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 |||||||| || ||||| ||||| |||||||| |||| |||||| | | ||||| | | Sbjct 392066 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 392007 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| |||||||| || | ||||| ||||| Sbjct 392006 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTT 391949 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||| |||| || | ||||||||| ||||||||||||||| | Sbjct 391948 TGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGA 391889 Query 38431 AGG 38433 ||| Sbjct 391888 AGG 391886 >seq86 Length=502408 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||||||||| | ||||| ||||| | || | ||| ||||| ||||| || Sbjct 229742 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 229683 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 || | ||||||||| |||||||||||| || ||||| ||| || || || | || || Sbjct 229682 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGC-ACCCTCCACCTCGTCCT 229624 Query 38456 GCGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 229623 CCGTCTGCGTGGTGG 229609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171712124160