Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq103 217 2e-51 seq153 89.7 6e-13 >seq103 Length=313272 Score = 217 bits (240), Expect = 2e-51 Identities = 891/1385 (64%), Gaps = 31/1385 (2%) Strand=Plus/Minus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| ||||||| || || ||||||| || |||||||||||||| | | | |||||| Sbjct 239976 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 239917 Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 239916 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 239858 Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399 ||| ||| ||||| | | |||||| | | |||| ||||| ||| || | Sbjct 239857 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 239798 Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459 |||||||| | || || | | ||||| ||||| ||| ||||| |||||||| Sbjct 239797 TGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 239738 Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517 | || | || | | || |||| | ||| || || | || ||||| || | Sbjct 239737 TCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGCACA 239680 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || | ||| || | |||||||| || || | |||| ||| || || || || | || Sbjct 239679 TCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAG 239620 Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631 | || ||||| ||| | | | || ||||| | || || |||||||| || Sbjct 239619 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGAC 239563 Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691 ||||| ||||| | || | || ||||| || | ||||| | ||| | ||| Sbjct 239562 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 239503 Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751 | || | | || |||||||| || || || ||| |||| || || || || Sbjct 239502 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 239443 Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810 ||| |||| | || || || || || || ||||| || || | ||||| ||||| Sbjct 239442 TGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACGAGTT 239384 Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869 | | || ||| ||||| |||| ||| || ||| || ||| || | || Sbjct 239383 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 239325 Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929 | | ||| | ||||||||| | | ||||| ||||| || ||||| | || || | Sbjct 239324 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 239265 Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989 ||||||| || ||| ||||| || || |||||| | || || ||||||||||| | Sbjct 239264 ACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCTCTA 239205 Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049 || | ||||| || || | |||||| | | | |||||| ||||| |||||| ||| Sbjct 239204 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATCTGG 239145 Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109 | || | || || || | || ||| | |||| |||||| | | |||| Sbjct 239144 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 239085 Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169 |||| || |||| || | || || || || ||| ||| || | || | | Sbjct 239084 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 239025 Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228 | || || ||| || |||||| || | || ||| |||| |||||| | ||||| Sbjct 239024 ACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 238966 Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288 | ||||| || |||| || | |||| |||| || || ||| |||||| Sbjct 238965 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 238906 Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348 ||| | ||| | || ||||| ||||||||||| || | || ||||| || || Sbjct 238905 GAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTCTTGAGGCTTCATGCGAG 238846 Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406 | ||| ||||| | ||| | || ||||||| || ||||| | || || || | Sbjct 238845 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 238788 Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463 ||| |||| || ||||||| ||| | ||| | || || ||||||| | | Sbjct 238787 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 238731 Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523 |||||| ||| || | ||| | || ||| ||| | | || || ||||||| Sbjct 238730 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 238671 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583 ||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| |||| Sbjct 238670 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 238611 Query 76584 TCTAC 76588 | ||| Sbjct 238610 TTTAC 238606 >seq153 Length=1106928 Score = 89.7 bits (98), Expect = 6e-13 Identities = 326/503 (65%), Gaps = 22/503 (4%) Strand=Plus/Plus Query 65025 GAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083 |||||| | ||||| || |||| ||| |||| |||| | |||||| || | Sbjct 841698 GAAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGA-CATTCGCCCTCCGTC 841756 Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142 | |||| ||||| || ||||||||||||||||| || || || ||| ||||| | Sbjct 841757 TCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATC-TTTTGCTGCTATCTTC 841815 Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202 ||| ||||||| || ||||||||| | || || ||||| || || || || ||||| Sbjct 841816 TGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGT 841875 Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCC 65262 |||||||| | ||| || || ||| || ||| | | || || | || Sbjct 841876 GATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCG 841935 Query 65263 ACTACC--GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCA 65320 | ||| | | | || |||| | | ||||| || ||| ||| | | |||| Sbjct 841936 A--ACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCT 841993 Query 65321 TCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACA 65380 | ||||| || ||||| || || | || |||||| ||| ||||| | |||| Sbjct 841994 TGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACA 842053 Query 65381 TTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG--GGTGCCACCCA-----TTTGG 65433 |||| | || | ||||| || || ||||| | || | | | | Sbjct 842054 TTGAATTCGTCGCCGATCGCCTACT-------GTTGGCACTCGGCAACAAGAAGTTCTAC 842106 Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 ||||| | || || || ||||| ||||| |||||| || | || |||||||||||| Sbjct 842107 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 842166 Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||| ||||| || || Sbjct 842167 TTCGAGAAGCGTGTTGGCGAGTA 842189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568302461120