Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07-
28] 174 sequences; 30,259,387 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq103 217 2e-51
seq153 89.7 6e-13
>seq103
Length=313272
Score = 217 bits (240), Expect = 2e-51
Identities = 891/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Minus
Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280
||| ||||||| || || ||||||| || |||||||||||||| | | | ||||||
Sbjct 239976 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 239917
Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 239916 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 239858
Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399
||| ||| ||||| | | |||||| | | |||| ||||| ||| || |
Sbjct 239857 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 239798
Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459
|||||||| | || || | | ||||| ||||| ||| ||||| ||||||||
Sbjct 239797 TGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 239738
Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517
| || | || | | || |||| | ||| || || | || ||||| || |
Sbjct 239737 TCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGCACA 239680
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| | ||| || | |||||||| || || | |||| ||| || || || || | ||
Sbjct 239679 TCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAG 239620
Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631
| || ||||| ||| | | | || ||||| | || || |||||||| ||
Sbjct 239619 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGAC 239563
Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691
||||| ||||| | || | || ||||| || | ||||| | ||| | |||
Sbjct 239562 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 239503
Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751
| || | | || |||||||| || || || ||| |||| || || || ||
Sbjct 239502 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 239443
Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810
||| |||| | || || || || || || ||||| || || | ||||| |||||
Sbjct 239442 TGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACGAGTT 239384
Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869
| | || ||| ||||| |||| ||| || ||| || ||| || | ||
Sbjct 239383 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 239325
Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929
| | ||| | ||||||||| | | ||||| ||||| || ||||| | || || |
Sbjct 239324 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 239265
Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989
||||||| || ||| ||||| || || |||||| | || || ||||||||||| |
Sbjct 239264 ACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCTCTA 239205
Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049
|| | ||||| || || | |||||| | | | |||||| ||||| |||||| |||
Sbjct 239204 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATCTGG 239145
Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109
| || | || || || | || ||| | |||| |||||| | | ||||
Sbjct 239144 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 239085
Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169
|||| || |||| || | || || || || ||| ||| || | || | |
Sbjct 239084 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 239025
Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228
| || || ||| || |||||| || | || ||| |||| |||||| | |||||
Sbjct 239024 ACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 238966
Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288
| ||||| || |||| || | |||| |||| || || ||| ||||||
Sbjct 238965 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 238906
Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348
||| | ||| | || ||||| ||||||||||| || | || ||||| || ||
Sbjct 238905 GAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTCTTGAGGCTTCATGCGAG 238846
Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406
| ||| ||||| | ||| | || ||||||| || ||||| | || || || |
Sbjct 238845 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 238788
Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463
||| |||| || ||||||| ||| | ||| | || || ||||||| | |
Sbjct 238787 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 238731
Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523
|||||| ||| || | ||| | || ||| ||| | | || || |||||||
Sbjct 238730 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 238671
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| ||||
Sbjct 238670 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 238611
Query 76584 TCTAC 76588
| |||
Sbjct 238610 TTTAC 238606
>seq153
Length=1106928
Score = 89.7 bits (98), Expect = 6e-13
Identities = 326/503 (65%), Gaps = 22/503 (4%)
Strand=Plus/Plus
Query 65025 GAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083
|||||| | ||||| || |||| ||| |||| |||| | |||||| || |
Sbjct 841698 GAAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGA-CATTCGCCCTCCGTC 841756
Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142
| |||| ||||| || ||||||||||||||||| || || || ||| ||||| |
Sbjct 841757 TCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATC-TTTTGCTGCTATCTTC 841815
Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202
||| ||||||| || ||||||||| | || || ||||| || || || || |||||
Sbjct 841816 TGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGT 841875
Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCC 65262
|||||||| | ||| || || ||| || ||| | | || || | ||
Sbjct 841876 GATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCG 841935
Query 65263 ACTACC--GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCA 65320
| ||| | | | || |||| | | ||||| || ||| ||| | | ||||
Sbjct 841936 A--ACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCT 841993
Query 65321 TCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACA 65380
| ||||| || ||||| || || | || |||||| ||| ||||| | ||||
Sbjct 841994 TGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACA 842053
Query 65381 TTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG--GGTGCCACCCA-----TTTGG 65433
|||| | || | ||||| || || ||||| | || | | | |
Sbjct 842054 TTGAATTCGTCGCCGATCGCCTACT-------GTTGGCACTCGGCAACAAGAAGTTCTAC 842106
Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493
||||| | || || || ||||| ||||| |||||| || | || ||||||||||||
Sbjct 842107 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 842166
Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||| ||||| || ||
Sbjct 842167 TTCGAGAAGCGTGTTGGCGAGTA 842189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568302461120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |