Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq153 224 1e-53 seq163 152 7e-32 seq98 150 2e-31 seq102 91.5 2e-13 >seq153 Length=1106928 Score = 224 bits (248), Expect = 1e-53 Identities = 470/698 (67%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| || |||||||| || || || || ||||| || || ||| | | | Sbjct 292952 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGA 292893 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 ||||||| | ||||| ||| | || || || || ||||| ||||| || || | ||| Sbjct 292892 GATGATCGCATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 292833 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| ||||| | || ||||| | || ||||| || || || ||| || |||||| Sbjct 292832 GCCTTCACAGACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAAC 292773 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || || || ||||| ||||| ||||| | || || |||||||| || | Sbjct 292772 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 292713 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 || |||| ||||| ||| ||| | | | ||| | || | | || | ||||| Sbjct 292712 GTGCAAGCAGATATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCA 292656 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || || || || | || ||| |||| || || | || || || || || | Sbjct 292655 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 292596 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| ||||| || || || | | | ||| || || || | Sbjct 292595 ATGATTCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 292536 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || || || || || || |||| || || || ||||| || || |||||||| Sbjct 292535 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCC 292476 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||||| || || ||| || | || ||||| || || || || || || ||| Sbjct 292475 GGCCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATT 292416 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| | || | || ||||| | ||||| ||||| ||| Sbjct 292415 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 292356 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| | Sbjct 292355 GGTGGTACCTTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCC 292296 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||||| | |||||||| || ||||| Sbjct 292295 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGA 292258 >seq163 Length=1072245 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || || |||||||||||||||||||| || || ||||| || | || | Sbjct 361299 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGATACCATCGACAATGTGAAGAGC 361240 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||||||||||||||| || |||||||| | ||||| || || || Sbjct 361239 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 361180 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || ||||| | || |||||| |||| |||||| ||||| || Sbjct 361179 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 361120 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 361119 CTCGTCCTCCGTCTTCGTGGTGGT 361096 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || |||||||||||||| |||| Sbjct 361100 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 361041 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || |||| | ||||| || || ||||| || || ||||| | Sbjct 361040 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 360981 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || |||||||| || || ||||| || ||||| ||||| || | || | Sbjct 360980 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACT 360921 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || || || || ||||| ||| | || || | || || |||||| Sbjct 360920 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 360868 >seq98 Length=1626709 Score = 150 bits (166), Expect = 2e-31 Identities = 197/272 (72%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || |||||||||| ||| || |||| || || |||||||||| ||| || Sbjct 836287 ACCGTCCCAGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 836228 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || ||||| || ||||| || || |||||| Sbjct 836227 GCCGGACTCAACGTTCTCCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 836168 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| | || ||| || | |||| ||||| ||||||||| Sbjct 836167 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 836108 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| ||||| | || ||| | ||| || |||||||| ||| Sbjct 836107 ACTTTCGATGTCTCCCTTCTTCATATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 836048 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || ||| | |||||| | |||||||| Sbjct 836047 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 836016 Score = 102 bits (112), Expect = 1e-16 Identities = 250/375 (67%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118 ||||| ||||| || | || || || || |||||||| |||||||| || | |||| Sbjct 835836 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 835779 Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178 ||||||| | | || || ||||| | || || || || ||| | || | || | Sbjct 835778 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 835719 Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236 ||||||| ||||| || || | ||| | | || | || | || | || || Sbjct 835718 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 835661 Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 || || || || |||||| || || ||| |||||||| || || || ||||| Sbjct 835660 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATCGTGCTTGT 835601 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||||| || || | || || ||||||||| || Sbjct 835600 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 835541 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | | || | |||||||| ||||| || || || || || || ||||||||||| Sbjct 835540 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGGGCCGCCGTTCAGGC 835481 Query 196417 TGCTATTCTCTCAGG 196431 | ||| ||||| || Sbjct 835480 CGGTATCCTCTCTGG 835466 >seq102 Length=325536 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/331 (67%), Gaps = 13/331 (4%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || || | | | || ||| || | | ||||| || || Sbjct 200293 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 200352 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || || || |||||||||| | || || Sbjct 200353 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 200412 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| ||||| || || || || | || || || || Sbjct 200413 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 200472 Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||||| ||||||| || |||| | ||| ||| || ||||||||||||| Sbjct 200473 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTCGGTGGTGGTA 200524 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| | | | | | || ||| | ||||| || |||| || || | Sbjct 200525 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 200584 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || ||||| |||||||| || ||||| Sbjct 200585 GTGACACCCATCTTGGTGGTGAGGACTTCGA 200615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657860969149280