Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07- 28] 174 sequences; 30,259,387 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq103 219 5e-52 seq153 123 3e-23 >seq103 Length=313272 Score = 219 bits (242), Expect = 5e-52 Identities = 1113/1748 (64%), Gaps = 47/1748 (3%) Strand=Plus/Plus Query 117836 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 117895 ||||||||||||||| || |||||||| || ||||||| || | ||||| || Sbjct 238261 TCGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCAGCGAAGTGCATGCTGGT 238320 Query 117896 CAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | |||||| | ||| || ||||| || || || || ||||| || Sbjct 238321 AATCTTGCCCATGGTTGGCTCCTTCATATGGATGTTCAAGCTCTGAGACTGGTCGATAAA 238380 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGT 118012 || || || || ||||| | ||| || || |||| ||||| || || Sbjct 238381 AGCACCACGGTCAGCAGCCATCTG---CACGATGTTACGCTGGCTGATCTCCCAGACGGT 238437 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | ||||||| ||| | || ||||| || | ||| || ||||| ||| | Sbjct 238438 CTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGAGCCATTGTC 238497 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 || ||| | | |||||| | || ||||||||| ||| | |||||||| || Sbjct 238498 AGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGAGATCCTTCAG 238557 Query 118133 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATT 118189 || ||| | |||| || ||||| || || | || | ||| || || || Sbjct 238558 AAGCCATGGGT--TGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAGTAAATGTT 238614 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | | ||||||||||| |||||||| || |||| ||| || | || |||||||| || Sbjct 238615 GCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGG 238674 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTT---CCCTAATGCGTTCCTTGAG 118306 ||| || || | |||||| ||| || | ||| | | | | ||| ||||||| Sbjct 238675 CATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC---CCTTGAG 238731 Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTTG---TCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 ||| ||||||| || | | | ||| ||| ||||| || ||||||| Sbjct 238732 TGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCC---CACATGTCGTACTGGAGCTC 238788 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 || || || |||| || || ||||||| || || || ||| || | || Sbjct 238789 GCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTC 238848 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | ||||| || || || |||||||| || |||||||| | ||| | |||| Sbjct 238849 GCATGAAGCCTCAAGAGCAGCATGATACATGGTCTCAAAAATCTGGATATTAAGCTCCTT 238908 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 |||||| || || || | | ||| | || |||| || ||||| | ||| Sbjct 238909 GGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGAC 238968 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAA 118602 ||| || ||||| || || || | | || ||| || || ||| || || || Sbjct 238969 ACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACTGGGTAGT 239027 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | || | ||||| | | || || || ||||| || || |||| || ||||| | Sbjct 239028 AGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTT 239087 Query 118663 TTTCGTAATCAAAA-CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | | | | |||||| | || |||| | ||| || | || || || | || ||| Sbjct 239088 TCTTGAAGTCAAAAACCTCGT-TCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCC 239146 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 ||||| || |||| | |||||| | ||| |||||| || || || |||||||| || Sbjct 239147 AGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTA 239206 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || ||||| |||||||| | ||||| ||||| ||| ||| || |||||||| Sbjct 239207 GAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTAC 239266 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCA 118901 || ||| | || || || ||||| || || | || ||||||||| | ||| | | | Sbjct 239267 AGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGA 239326 Query 118902 GCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | || || | | | || ||| ||| || ||| || | | ||| Sbjct 239327 GCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAAC 239386 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTG 119020 || ||||| | || || || || || || || |||| || | |||| ||| Sbjct 239387 TCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAGTCCAAGT 239445 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080 || || || || |||| ||| ||||| || || |||||||| || |||| | ||| Sbjct 239446 GCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATC 239505 Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || ||| ||||||| | || || || || | |||| || | ||||| || Sbjct 239506 GCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTC 239565 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTG 119194 || |||||||| || ||||| | || | | | ||| |||| ||| |||| Sbjct 239566 TGCATGCCACGGCTCAAGGTAGATGGCAAAAG-CACCTG--GACGCTTGTTGCCACCCTG 239622 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 || || || | |||||| |||| | || || |||||||| | | ||| | |||| Sbjct 239623 GTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 239682 Query 119255 GCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312 ||| ||||| || | ||| | ||| || |||| |||| | ||| | || | |||| Sbjct 239683 GCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATGAAGACCA 239740 Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372 ||||| || || ||| ||||| || || | |||| | ||||||| ||||| Sbjct 239741 ATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCA 239800 Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACC 119431 || |||| |||| | || | | ||||||| | | || | |||| || ||||| Sbjct 239801 ATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCG-CCTGTGGGGTACC 239859 Query 119432 AGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG-GACATCTTGTCGTAGG 119490 ||| |||| || ||||| | || || |||| ||| | ||||| | || ||| | Sbjct 239860 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGTTGTATG 239918 Query 119491 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550 |||| | | || |||||||||||| ||||| |||| | || ||||| | ||| | Sbjct 239919 TCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCT 239978 Query 119551 ATTGGGGT 119558 ||| ||| Sbjct 239979 GTTGCGGT 239986 >seq153 Length=1106928 Score = 123 bits (136), Expect = 3e-23 Identities = 528/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| ||| ||| || |||||||| Sbjct 842189 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 842130 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | | ||| || | | | | | | || Sbjct 842129 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT------ 842076 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || ||||| | |||| | |||||||| | ||||| | | |||||| || | || Sbjct 842075 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 842016 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || ||||| || ||||| | |||| ||| ||| || || || || | |||| Sbjct 842015 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 841956 Query 129962 GCGTG---AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 || || || || || | || | || || | | ||| || ||| Sbjct 841955 CTCTGCACAAGGGCCTG-GTTC--GGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 841899 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || ||| | ||||| |||||||||||||| || |||||||| || || | | Sbjct 841898 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 841839 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 |||||||| || ||||||| |||||| || ||| ||| || |||||||||||||| ||| Sbjct 841838 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 841779 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197 || || || || |||| |||||| || || | || | |||| | || ||| Sbjct 841778 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCA 841720 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 130256 || |||||| | ||||| | ||| || |||| | | | ||| || || || Sbjct 841719 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 841660 Query 130257 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316 || ||| | || ||| || ||||||| |||| ||||| |||||||| ||| Sbjct 841659 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 841601 Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| | | ||| || | ||| | ||||||| | || || || ||||| Sbjct 841600 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 841542 Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434 |||||| || || | | || ||||| ||||| |||||||| | || || Sbjct 841541 ACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAA 841483 Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491 || || |||| | ||||| |||| | ||||| | | | |||||||| Sbjct 841482 GAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTC 841423 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || ||||||||||| ||||| | |||||| || ||||| Sbjct 841422 GTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 841384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433854903440