Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07-
28] 174 sequences; 30,259,387 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq153 145 2e-29
seq163 113 1e-19
seq102 104 7e-17
>seq153
Length=1106928
Score = 145 bits (160), Expect = 2e-29
Identities = 468/726 (64%), Gaps = 3/726 (0%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || ||||| || ||||| || || || || || | | | | | |||||||
Sbjct 292943 GCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGATCGC 292884
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| || || || || || ||||| || ||| | ||||| || |||| ||| || || ||
Sbjct 292883 ATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTCGCCTTCACA 292824
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| | || |||||| |||| || || || | || || ||| |||
Sbjct 292823 GACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCAGCAAAC 292764
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || || || || |||||| | || || | | || ||| | ||| |
Sbjct 292763 ACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAGGTGCAAGCA 292704
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
||| | || || ||||| || | || | || | ||| || ||| | || |
Sbjct 292703 GATATGAAGCACTTTCCCTTCAAGGTCATCGAGAAGGCCGGC---AAGCCAGTCATCTCG 292647
Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558
|| || | || || || | || || || ||| || || || || | ||| || |
Sbjct 292646 GTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCCATGATTCTC 292587
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
|| ||| || | || || | || | |||| || || | | || || |
Sbjct 292586 ACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAACGCCGTCGTC 292527
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
|| || ||||| ||||| || || | ||||| ||||| || || || ||| ||||
Sbjct 292526 ACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCCGGCCTCATT 292467
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | || || || | || || || || || ||||| ||||| ||||| || ||
Sbjct 292466 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATTGCCTACGGT 292407
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
|| || || | || ||| || ||| | || || || ||| | |||||||||||
Sbjct 292406 CTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGTGGTGGTACC 292347
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|| |||||||| || || ||| |||| ||||| ||||| || || || | ||||| |||
Sbjct 292346 TTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCCACTGCCGGT 292287
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || || | ||||| || || || || || || || || || || || || |||
Sbjct 292286 GACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTTGTCAACCACTTCGTAAACGAA 292227
Query 349919 TTTAAG 349924
|| |||
Sbjct 292226 TTCAAG 292221
>seq163
Length=1072245
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| ||||| ||| || ||||| || || ||
Sbjct 361093 CATACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTC 361152
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || || || || || || || || || | |||||||| |||||
Sbjct 361153 GGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGG 361212
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
||||| ||||| |||||||| || || ||| || ||||| || || | ||| || | |
Sbjct 361213 TGGAATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTATCGGACGACT 361271
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|||| || || |||| ||||| ||||| | |||
Sbjct 361272 CAACCTCGAGGGTAATGGTCTTGCCGGTGACTGT 361305
Score = 104 bits (114), Expect = 7e-17
Identities = 166/236 (70%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || | || ||||| || ||||| || || || |
Sbjct 360861 TTTGCATACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGT 360920
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || || || || || ||||| || || || ||||| |
Sbjct 360921 AGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGT 360980
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||| || || || || || ||||| || || | || ||||| || || | || | ||
Sbjct 360981 CAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTG 361039
Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || || | ||||| ||||| || || || || || ||||||||
Sbjct 361040 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 361095
>seq102
Length=325536
Score = 104 bits (114), Expect = 7e-17
Identities = 244/368 (66%), Gaps = 3/368 (1%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| ||||| | ||||| ||| | | | || ||||||||| | || || |||| |
Sbjct 200263 CCAGAAGAGGTCTCATCCATGATCCTGGGCAAGATGAAGGAAGTCGCCGAGTCATACCTC 200322
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| |||| || || | || || | || || |||||||| || || || |||||||||
Sbjct 200323 GGCGAAAAGGTCACCAACGCAGTCGTCACAGTCCCAGCCTACTTCAACGACGCCCAGCGT 200382
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
| || || || || ||||||| || || || | || || || | | | || |||
Sbjct 200383 GCCGCTACCAAGGACGCTGGCACGATCGCCGGTCTCAACGTCCTCCGTGTCGTCAACGAA 200442
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
|| || || || || | || || || || || || || ||| | ||| | ||
Sbjct 200443 CCTACCGCCGCCGCTCTCGCCTACGGCCTCGACAA---GACCGACAAGGAACGCCAGATC 200499
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
|| | | || | |||||||||||||| ||||| || | | || | || ||||
Sbjct 200500 ATTGTCTACGACCTCGGTGGTGGTACTTTCGATGTCTCCATCTTGACTGTCGACCAGGGT 200559
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891
| || || ||| | ||||| || ||||| || ||||||||||| || || || || |
Sbjct 200560 GTGTTCGAGGTTCAGGCAACGGCCGGTGACACCCATCTTGGTGGTGAGGACTTCGACCAG 200619
Query 349892 CGTCTCGT 349899
||| ||||
Sbjct 200620 CGTGTCGT 200627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251021929722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |