Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq309 134 2e-26 >seq309 Length=301579 Score = 134 bits (148), Expect = 2e-26 Identities = 626/981 (64%), Gaps = 32/981 (3%) Strand=Plus/Minus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 53746 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCA 53687 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||| | |||| | ||||||||| || | ||| | || || ||||| ||| Sbjct 53686 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 53627 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 53626 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 53567 Query 53885 CAGAC-----GA-CACGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 53935 || | || ||||| || | | | | | ||| |||||| || || Sbjct 53566 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 53516 Query 53936 AGTGTATACAA-TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 53994 | |||| || || || |||||| || | |||| || ||||| ||||| | Sbjct 53515 CGCTCGTACAGCTCCTTGAA-CTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTT 53457 Query 53995 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 54054 || ||||| | | ||| |||| | | || || | |||||||||||| ||||| Sbjct 53456 GGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 53397 Query 54055 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 54114 ||| ||||| || | ||| | | | | ||| || ||||| ||||| ||| Sbjct 53396 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 53337 Query 54115 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGG 54174 || | |||| ||| | || | |||||||| || | ||| |||| | | | || || Sbjct 53336 GTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 53277 Query 54175 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 54234 || ||||| || ||||| || | ||| | || ||||| || || |||| | |||||| Sbjct 53276 ACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGG 53217 Query 54235 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 54294 | || ||| ||||||| || || || ||| || || || |||| | || || Sbjct 53216 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 53157 Query 54295 ACTAA-TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353 || ||| ||||| || || || || | || ||||| | || ||| || | | Sbjct 53156 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 53098 Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413 |||| ||||| || || || || |||||| ||||| | | || ||| || | Sbjct 53097 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 53041 Query 54414 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 54469 | || || || || || ||| | || | || || ||||| || || || | || Sbjct 53040 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 52982 Query 54470 TCAGA-AAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 54528 || | |||| || || |||||||| |||| || || || ||||| || || Sbjct 52981 AACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGAC 52923 Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAA 54588 || |||||||| | ||| || || ||||| || | | |||| | ||| | || | Sbjct 52922 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAG 52863 Query 54589 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648 ||| ||| |||| ||| || || || || || | ||| ||||| || || || | Sbjct 52862 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGAC 52803 Query 54649 AATAACTGAGTTGAGTTTATC 54669 ||| | ||||| || | ||| Sbjct 52802 AATGGCCGAGTTCAGCTCATC 52782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717755652640