Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq309 439 2e-118 seq474 188 6e-43 seq110 111 1e-19 seq443 86.0 6e-12 >seq309 Length=301579 Score = 439 bits (486), Expect = 2e-118 Identities = 1037/1548 (67%), Gaps = 42/1548 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | ||| || || || |||||||||| |||| | | Sbjct 54315 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 54256 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || || |||| ||||| | |||||| || || ||||||||||| | Sbjct 54255 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 54196 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | || ||||||| | || || | |||||| | |||||||| Sbjct 54195 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 54136 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689 | || |||| || ||| ||| ||||||| ||||| || | | |||| |||| | Sbjct 54135 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 54080 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || |||| ||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 54079 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 54021 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805 | || | | ||| || ||||| || || | |||| | || ||| ||||| Sbjct 54020 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGA 53961 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | ||||| || | || ||| || || || | ||| | || || | || Sbjct 53960 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 53905 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923 | || ||||||| | || | |||| |||||| || | || || | || Sbjct 53904 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACCGGGTAGTAGTTGAT 53847 Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983 ||||| || |||||| ||| | || || | ||| || | | || Sbjct 53846 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 53787 Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 ||| |||| | |||| || | || | || | || | ||| || |||||| Sbjct 53786 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 53729 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| || | | |||||| | || || || || | ||| | | Sbjct 53728 CAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 53669 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||| | ||| |||||||||| || || ||| | |||||||| || ||| Sbjct 53668 TTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 53609 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || ||||| |||||| ||||| ||||| || || ||| || ||||||| || Sbjct 53608 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 53549 Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| | Sbjct 53548 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 53490 Query 23278 ACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGT 23336 |||||| ||| || | ||| || || ||| | || ||||| ||| |||| | || Sbjct 53489 ACCGTAGACA-TCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGT 53431 Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 | ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| | Sbjct 53430 TCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCG 53371 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | || || || || || || |||||| | |||| || | || ||||| || | Sbjct 53370 CACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCGT 53311 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || |||| Sbjct 53310 GCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGT 53251 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 |||| || ||||||||||| |||| |||||| || || ||||||||||| | |||| | Sbjct 53250 AACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTG 53191 Query 23577 CGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635 | |||||| | || ||| | || | | ||||||||| || | ||| || || || Sbjct 53190 TG-CCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCA 53132 Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695 | || || ||||| || ||| || || || |||||||| || || |||||||| Sbjct 53131 GCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCA 53072 Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755 || || | || |||||||| || || | | ||||| | || ||| | || ||| Sbjct 53071 TCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAA 53012 Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGG 23813 ||||| || || || || ||||| | || |||||| ||| || || || ||||| | Sbjct 53011 AGTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTATATGTCTCGATCG 52954 Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 | || |||||||| || ||||| || |||| || || ||||| ||||| | ||| |||| Sbjct 52953 CTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTC 52894 Query 23874 TCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930 ||||| ||| | ||| | |||| ||| || ||||| || | || || || || | Sbjct 52893 TCTCGGCAACCTT---GCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGC 52837 Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 | || || | ||||| ||||| || || | || |||||||| |||| Sbjct 52836 CGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 52789 >seq474 Length=994170 Score = 188 bits (208), Expect = 6e-43 Identities = 562/858 (66%), Gaps = 23/858 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| || || || || ||||| | || || | || ||| Sbjct 271341 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 271282 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || || || || || | Sbjct 271281 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 271222 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| | Sbjct 271221 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 271162 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| | ||||||| ||||||| ||||| || || | || Sbjct 271161 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 271102 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || || | ||||| || ||||||||||| ||| | | || ||| | Sbjct 271101 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 271042 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | ||| | || |||||||| || ||||| | || || ||| || |||||| | Sbjct 271041 CAGCGAA-CATAC-CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 270984 Query 57925 AGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 | ||| | | |||||| | ||| | | || |||||| | || || Sbjct 270983 ACTGGGCGTTGCGATGGATTTCTGACAAGAACT----CGACATTCGCCCTCCGTCTCATT 270928 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || ||||| ||||| || || ||||| || || || ||| || Sbjct 270927 GCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 270868 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 |||||||| || || ||| |||| || || || |||||| | || || || || ||| Sbjct 270867 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 270808 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 || | || || || || || ||||| ||| ||| || | || || |||| | | Sbjct 270807 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 270748 Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220 | | | | ||| ||||||||||| ||| ||||||| | ||||| | || || Sbjct 270747 GCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 270688 Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 || || || | || | || || |||||| || | |||||| | |||||||| | Sbjct 270687 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 270630 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 | || ||||| | || || | | ||| | ||| || |||||| | | || Sbjct 270629 TCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 270572 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396 || || || || ||| | || ||||| | |||||||| ||||| ||||| || Sbjct 270571 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 270512 Query 58397 aGTTAGCGAATATCAAAA 58414 ||| ||||||| || || Sbjct 270511 TGTTGGCGAATACCAGAA 270494 >seq110 Length=1282662 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || |||||| |||| || || | | Sbjct 75441 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 75500 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| || | || || |||||| Sbjct 75501 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 75560 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | || || | ||| || ||| || ||| Sbjct 75561 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 75620 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||||||||| || |||| ||| | || | || |||| Sbjct 75621 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 75669 Score = 105 bits (116), Expect = 6e-18 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | ||| Sbjct 75669 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAATCATCC 75728 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || |||||||| ||| | || || ||||| Sbjct 75729 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 75787 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || ||||| ||||| ||| | || ||| Sbjct 75788 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGAC 75824 >seq443 Length=1028484 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||||||||| || || ||||| || ||||| |||| || || || ||||| || Sbjct 778575 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 778516 Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 || | ||||| ||| || | | ||||||||| || | || || |||||||||||| Sbjct 778515 GACAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 778459 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347 | || |||||||| || |||||||| || Sbjct 778458 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 778430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763513662560