Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq309 134 2e-26 >seq309 Length=301579 Score = 134 bits (148), Expect = 2e-26 Identities = 626/981 (64%), Gaps = 32/981 (3%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 53746 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCA 53687 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| | |||| | ||||||||| || | ||| | || || ||||| ||| Sbjct 53686 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 53627 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 53626 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 53567 Query 65916 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 65966 || | || | ||| || | | | | | ||| |||||| || || Sbjct 53566 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 53516 Query 65967 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 66025 | |||| || || ||||||||| || | |||| || ||||| ||||| | Sbjct 53515 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTT 53457 Query 66026 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 66085 || ||||| | | ||| |||| | | || || | |||||||||||| ||||| Sbjct 53456 GGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 53397 Query 66086 CCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145 ||| ||||| || ||||| | | | | ||| || ||||| ||||| ||| Sbjct 53396 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 53337 Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205 || | |||| ||| | || |||||||| || | ||| ||||| | | | || || Sbjct 53336 GTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 53277 Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || ||||| || ||||| || | ||| | || ||||| || || |||| | |||||| Sbjct 53276 ACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGG 53217 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 | || ||| |||||||| || || || ||| || || || | || | || || Sbjct 53216 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 53157 Query 66326 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384 || ||| ||||| || || || || | || ||||| | || ||| || | | Sbjct 53156 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 53098 Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444 |||| ||||| || || || || |||||| ||||| | | || ||| || | Sbjct 53097 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 53041 Query 66445 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 66500 | || || || || || ||| | || | || || ||||| || || || | || Sbjct 53040 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 52982 Query 66501 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 66559 || | |||| || || ||||| || |||| || || || ||||| || || Sbjct 52981 AACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGAC 52923 Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619 || |||||||| | ||| || || ||||| || | | |||| | ||| | | | Sbjct 52922 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAG 52863 Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679 ||| ||| |||| ||| || || || || || | ||| ||||| || || || | Sbjct 52862 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGAC 52803 Query 66680 AATAACCGAGTTGAGTTTATC 66700 ||| ||||||| || | ||| Sbjct 52802 AATGGCCGAGTTCAGCTCATC 52782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168538331120