Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq474 91.5 1e-13
>seq474
Length=994170
Score = 91.5 bits (100), Expect = 1e-13
Identities = 287/442 (65%), Gaps = 2/442 (0%)
Strand=Plus/Minus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|||||| | || ||||| || ||||| || || | || ||||| || ||||| || ||
Sbjct 270936 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATC 270877
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||||||||||||| |||||| | ||| | | || || |||||| | || |
Sbjct 270876 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCC 270817
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
||||| || || | ||| ||||| || || | ||||| ||| || |||||
Sbjct 270816 CGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAG 270757
Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980
||| |||| | || || ||||| | || ||||| || ||| || |||
Sbjct 270756 CCGAACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTC 270697
Query 22981 TTCCAAGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039
|| ||| || | | | || || || || ||||| || | ||| || ||
Sbjct 270696 TTGACAGACGCTCTTCCATGCA-AGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATA 270638
Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099
||| | || || || |||||||| || || || || | ||| | || ||||
Sbjct 270637 CATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCTACAACGC 270578
Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159
|||| || || || |||||||| |||||| | | || || || |||||||| ||
Sbjct 270577 CACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGA 270518
Query 23160 ACGCCGTGTGAGTGAATATCAG 23181
||||| | ||||| |||
Sbjct 270517 GAAGCGTGTTGGCGAATACCAG 270496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356231351052754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |