Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq474 91.5 1e-13 >seq474 Length=994170 Score = 91.5 bits (100), Expect = 1e-13 Identities = 287/442 (65%), Gaps = 2/442 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | || ||||| || ||||| || || | || ||||| || ||||| || || Sbjct 270936 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATC 270877 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||||||||||||| |||||| | ||| | | || || |||||| | || | Sbjct 270876 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCC 270817 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 ||||| || || | ||| ||||| || || | ||||| ||| || ||||| Sbjct 270816 CGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAG 270757 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 ||| |||| | || || ||||| | || ||||| || ||| || ||| Sbjct 270756 CCGAACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTC 270697 Query 22981 TTCCAAGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039 || ||| || | | | || || || || ||||| || | ||| || || Sbjct 270696 TTGACAGACGCTCTTCCATGCA-AGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATA 270638 Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099 ||| | || || || |||||||| || || || || | ||| | || |||| Sbjct 270637 CATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCTACAACGC 270578 Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 |||| || || || |||||||| |||||| | | || || || |||||||| || Sbjct 270577 CACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGA 270518 Query 23160 ACGCCGTGTGAGTGAATATCAG 23181 ||||| | ||||| ||| Sbjct 270517 GAAGCGTGTTGGCGAATACCAG 270496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231351052754