Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq309 134 2e-26
>seq309
Length=301579
Score = 134 bits (148), Expect = 2e-26
Identities = 468/723 (65%), Gaps = 12/723 (2%)
Strand=Plus/Minus
Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922
||||||||| || | ||||| | ||||| ||||||| || ||||| | | |||
Sbjct 53498 GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCA 53439
Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982
|| | | | || || | |||||||||||| |||||||| ||||| || |
Sbjct 53438 AGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAA 53379
Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042
||| | | | | || || ||||| ||||| ||| || | |||| ||| |
Sbjct 53378 ATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGAC 53319
Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102
|| | |||||||| || | ||| ||||| | | | || || || ||||| || |||||
Sbjct 53318 GTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTG 53259
Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162
|| | ||| | || ||||| || || |||| | |||||| | || ||| ||||||||
Sbjct 53258 GTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 53199
Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTGATAGACCTA 80221
|| || || ||| || || || |||| | || || || ||| ||||| |
Sbjct 53198 GCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGA-AGACCAA 53140
Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281
| || || || | || ||||| | || ||| || | ||||| ||||| || || |
Sbjct 53139 TACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAA 53080
Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTT 80337
|||| ||||| ||||| | | || ||| || | | || || || ||
Sbjct 53079 TGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCCTGTGGGGTA 53024
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTA 80396
|| ||| | || | || || ||||| || || || | || |||| |||| || ||
Sbjct 53023 CCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTATA 52965
Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456
||||| || |||| ||| || || ||||| || || || |||||||| | |||
Sbjct 52964 TGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCAT 52905
Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516
|| || ||||| || | | |||| || ||| | | | ||| ||| |||| |||
Sbjct 52904 CTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGT 52845
Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576
|| || || || || | ||| ||||| || || || | ||| ||||||| || |
Sbjct 52844 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAGCTC 52785
Query 80577 ATC 80579
|||
Sbjct 52784 ATC 52782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718264149209520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |