Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq474 226 4e-54 seq309 196 7e-45 >seq474 Length=994170 Score = 226 bits (250), Expect = 4e-54 Identities = 569/849 (67%), Gaps = 33/849 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||||||| ||||||| || ||||| | || ||| | |||||| Sbjct 271341 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 271282 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || | | || || ||| || || || Sbjct 271281 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 271222 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| |||| |||||||| || |||||||| || || || || || Sbjct 271221 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 271163 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| || || || |||| ||||| ||||| ||||| ||||||| Sbjct 271162 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 271104 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | ||||| || | || || || || || | ||||| |||| || Sbjct 271103 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 271044 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 ||| || |||| | || || || || ||||||| | || | || || | |||| Sbjct 271043 AGCAGCG--AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 270987 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 || | |||| | | || ||||| |||| | || || | | |||| | | || | | Sbjct 270986 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 270927 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 |||| |||||||| ||||| |||||||| || || |||||| || ||||| ||||| | Sbjct 270926 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 270867 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 |||| || || |||||| |||| || || | |||||| | || || || || |||| Sbjct 270866 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 270807 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612 || | ||| ||||| ||| || ||||| |||| ||||| | | || || Sbjct 270806 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 270753 Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 |||| | || || ||||| | ||||| ||||| | ||| || || |||| Sbjct 270752 ACCAGGCCCTTGTGCAGAGCATCA------TCACCGAGGCCGTCACGATCGAGCAGGAGT 270699 Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729 | | || || | || || || | | || |||||| || | || |||| | Sbjct 270698 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 270640 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786 ||||| || || || || ||||| ||||||| | | ||| ||||| | ||| Sbjct 270639 TACATTGAATTCGTCGCCGATCGCCTACTGT---TGGCACTCGGCAACAAGAAGTTCTAC 270583 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 ||||||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 270582 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 270523 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 270522 TTCGAGAAG 270514 >seq309 Length=301579 Score = 196 bits (216), Expect = 7e-45 Identities = 389/568 (68%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 |||||||||| ||| || || || |||||||| || | ||||| || || |||| Sbjct 53190 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTG-CACG 53248 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 |||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || || Sbjct 53249 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 53308 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| ||||| | | || || || | ||||| ||| ||| ||||| | || Sbjct 53309 GCACGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 53368 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | || ||||| || || |||||| | || ||| | || ||| |||| ||| | | Sbjct 53369 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 53428 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| |||| |||||||||||| || | || |||||||| ||| || || Sbjct 53429 GAACGGCACTTGGACTCTAATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTCTACGG 53488 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAG 97164 || ||||| ||| |||| | || ||| ||| ||| | ||||||||| Sbjct 53489 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 53548 Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 ||| ||| | || | ||| | || || | ||| ||| ||||| || || || | Sbjct 53549 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 53607 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283 |||||| |||||||| ||| || ||||| |||||||| | | ||| ||||||||| Sbjct 53608 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTT-GGCACCATC 53666 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343 ||| |||| ||| ||||||| || || | |||||| | ||||||| ||| || || Sbjct 53667 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTC 53726 Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371 ||| |||||| ||| | |||||||| Sbjct 53727 TGCAATCTGGCTTCGCTTGCTCTGCCCA 53754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054401641680