Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq110 197 3e-45 seq474 138 2e-27 seq443 125 1e-23 seq320 84.2 4e-11 >seq110 Length=1282662 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| |||||||| || |||||||| || |||||||| || || || Sbjct 75895 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 75836 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||||| || || || | |||||| |||||||| ||||| | || ||||| ||||| Sbjct 75835 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 75776 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| ||| Sbjct 75775 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 75716 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||| ||||||||||| || ||||| Sbjct 75715 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 75669 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || || ||||| |||||||| || ||||| Sbjct 75667 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 75608 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| ||||| Sbjct 75607 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 75548 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| |||| | || || Sbjct 75547 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 75489 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| ||||||||||| |||||||| Sbjct 75488 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 75441 Score = 104 bits (114), Expect = 4e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || ||| ||| || |||||||| || ||||| Sbjct 75439 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 75380 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||| || || || || || | | ||| ||||| |||||| Sbjct 75379 AGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGA 75320 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| ||| || ||||||||||| | || || || Sbjct 75319 ATGCCTTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 75260 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||| ||||| || || |||| Sbjct 75259 TCGAGGGTAATGGTCTTGCCGGTGA 75235 >seq474 Length=994170 Score = 138 bits (152), Expect = 2e-27 Identities = 299/441 (68%), Gaps = 10/441 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 270481 CATGACACCAGCCTTCTGGTATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 270540 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC---GCCAAACTGCTTGGGGTA 10051 || |||||| |||||||||||| |||||||| ||| | |||| ||| || Sbjct 270541 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTT---GTT 270597 Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111 |||||||| | | ||| || || ||||| || ||||| || ||| ||| | | Sbjct 270598 GCCGAGTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 270657 Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||| || | | ||| || | ||||| | ||| |||| ||| | | ||| Sbjct 270658 GTTCATCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGAC 270717 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231 || || || |||||||| || | | | || | ||||||||| || | ||| | Sbjct 270718 GGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAA 270777 Query 10232 CAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||| || | || | ||| ||| | |||||| || ||| ||||| |||||| || | Sbjct 270778 CAGAAGGCAGGCGAAGT-CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 270836 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCG 10349 | || |||| |||||| || || || ||||||||| || || ||| || || || Sbjct 270837 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA-AAAGATCCA 270895 Query 10350 GAGAACAGAAGACCCTCCACG 10370 ||||| | | |||||| ||| Sbjct 270896 GAGAAGAAGATACCCTCAACG 270916 >seq443 Length=1028484 Score = 125 bits (138), Expect = 1e-23 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325 || || | || |||||||| || |||||||| || | ||||| || |||||||| || | Sbjct 778389 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 778448 Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385 |||| || | | || ||||| ||||| || || |||||||| || ||||| ||||| Sbjct 778449 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 778508 Query 68386 CGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 | ||||||||||| ||| || || || || | |||||||| || || ||||||||| Sbjct 778509 CATTGTCGATGGTGTC-GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 778567 Query 68445 TTGACGAA 68452 || ||||| Sbjct 778568 TTTACGAA 778575 Score = 87.8 bits (96), Expect = 3e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 224979 ACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAG 225038 |||||||||||||||| | | |||||| | || || |||| || || || ||||| Sbjct 558369 ACCGCCACTGGATGTATTCGGACGGGGTCTTCTCGAGATGGTGGTCGATGTGCGCGAAAG 558428 Query 225039 CATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC- 225097 | ||||| | ||| || || || ||||| |||| | || ||| |||| Sbjct 558429 CGTGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGACGTCGCCGGCAGTCG 558488 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || || | ||| || || ||||| |||| ||| |||| |||||| |||||||| || ||| Sbjct 558489 GGATGAG-CTCACCAGTTAGGACGTTGACGAGAGTAGACTTGCCGGCACCATTTGGCCCA 558547 Query 225158 ATCACGCCAATCCGGGA 225174 || ||| |||| || || Sbjct 558548 ATGACGGCAATACGAGA 558564 >seq320 Length=289873 Score = 84.2 bits (92), Expect = 4e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 177098 AATCTCGGCGTTGTTAGTAATACTAGAC-ACAGACGCATCACGGACATTCAGTAGCTTAC 177156 |||||||||||| || | ||| || | | | || ||||| || ||||| || | ||||| Sbjct 81091 AATCTCGGCGTTCTTTGAAAT-CTGGTCGATGGAAGCATCGCGCACATTGAGAATCTTAC 81149 Query 177157 CACGGAGGGGGAAAATTCCGTAGCGATCCCGACCCACGACAGCAAGGCCAGCTGTGGCAA 177216 |||| || || || | || | | || | || ||||| | || || |||| Sbjct 81150 CACGAAGTGGAAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCAAGAGCAA 81209 Query 177217 GCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAGCGTGCACATTCCAGAGTGCTTCGTGC 177276 || ||||||||||||||| |||||||| |||||||||||| | | || |||||| | Sbjct 81210 GCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTGTGACCGTCCTTCGTAC 81269 Query 177277 CCGCC 177281 | ||| Sbjct 81270 CGGCC 81274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616432494960