Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq309 134 2e-26 >seq309 Length=301579 Score = 134 bits (148), Expect = 2e-26 Identities = 444/673 (66%), Gaps = 22/673 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||||| |||||| |||||||| ||| || ||| | || | || || |||||| Sbjct 53699 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCT 53640 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||||||||| || ||||||||||| ||||| || | ||| |||| |||| | || Sbjct 53639 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 53580 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060 | ||||| ||| | || |||| || || |||| | | |||| | Sbjct 53579 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 53522 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 || || ||||||| || || || |||||| || ||| ||| || || ||| Sbjct 53521 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCAT 53462 Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||||| ||||| |||| ||| | | | || | || || | || |||||| || || Sbjct 53461 TCGTTGGGGCACATTAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 53403 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 | ||||| || |||| |||| ||| || || | || | | || | |||| ||||||| Sbjct 53402 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 53343 Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | ||||| | | ||| | ||| |||||||||||||| | | | ||| | Sbjct 53342 GCGAAGGTCCATGAA--CTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAA 53285 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAGTCATCGCGTTGAAAAC 205353 || ||||| | |||||| ||||||||||| || | ||| ||| | |||| | || Sbjct 53284 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC-AGTGTT---GTTGTAGAC 53229 Query 205354 TCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTC 205413 ||| ||||| || || |||||||||| || ||||| |||| | ||| |||||| Sbjct 53228 TCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGT 53169 Query 205414 AGCCCTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC 205472 ||||| | |||| || | | ||||| ||||||| ||||| |||| ||| | Sbjct 53168 GGCCCTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCAC 53110 Query 205473 A-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531 | ||||| || || |||||| || | ||| || ||| || | ||||| || Sbjct 53109 ATATCTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAG 53051 Query 205532 CACGAAGCCAGCT 205544 || || || |||| Sbjct 53050 CAGGATGCTAGCT 53038 Score = 86.0 bits (94), Expect = 1e-11 Identities = 222/336 (66%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 ||||||| || ||| || || || | || ||| | || | | | | |||| | ||| || Sbjct 54316 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTAT 54257 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || ||||| |||||| ||| | ||||| | ||| ||| || ||||| || || Sbjct 54256 GGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 54197 Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364 | ||| || |||||||||||||||| | || | ||| ||| || | || |||||| Sbjct 54196 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCC 54137 Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424 | | | || || ||||||||||||| |||| | ||| || ||||| Sbjct 54136 CAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGA 54077 Query 204425 CTGCCCTTGTACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCAT 204483 ||| ||| ||| ||||| | || | || || || |||| ||| || || | | Sbjct 54076 GAGCCTGGGTATGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAG 54018 Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 || || || ||||||||||| ||||| | ||| Sbjct 54017 AGCAGCATGATAGATGGTCTCAAAAATCTGGATGTT 53982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150051370080