Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq474 255 7e-63
seq165 132 6e-26
seq501 109 7e-19
>seq474
Length=994170
Score = 255 bits (282), Expect = 7e-63
Identities = 478/701 (68%), Gaps = 6/701 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || || |||||
Sbjct 817026 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAAATACCC 816967
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | || ||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 816966 TCCTCGATTGTGAGCAGCGACACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 816907
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| || || || || || ||||| |||
Sbjct 816906 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTTGGCTCA 816847
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| ||||||||||| | || || || || ||||||||
Sbjct 816846 TTGATGATACGGAGGACGTTGAGGCCAGCAATGAGACCGGCGTCCTTTGTTGCTTGTCGC 816787
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
||||| ||||| || || || || ||||| ||||| |||| |||| | ||| ||
Sbjct 816786 TGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAGG 816727
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
||||| || ||| | || ||| || || || | ||| | || ||||| || | |
Sbjct 816726 TACGACTCTGCGGTCTCACGCATCTTTGTGAGGATCATGGCGGAGATCTCCTCTGGTGTG 816667
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
||||| ||| || || || || || || || | || || |||| |
Sbjct 816666 AACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT---GCCAGCCTTCTCG 816610
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| ||||| | | | | ||||| || |||| |||| | ||| ||||| |
Sbjct 816609 ATGACCTTGAAGGGAAAGTGCTTCATGTCTGCTTGCACCTCTGCGTCTTGGAACTTGCGG 816550
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| | |||||||| || || ||||||||| ||||||||||| || |||||
Sbjct 816549 CCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGATTCTTG 816490
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || ||||| ||||| || | || || || |||||| | || || || ||
Sbjct 816489 GCGGCATCACCGATCAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGTG 816433
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || || ||||| || || || || | ||| || | | ||| || |||||
Sbjct 816432 CGGTTGCCCTGATCGTTGGCGATGATCTCAATGCGATCATCTCTGAAGATACCCACGCAA 816373
Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| ||||| || || || || |||||||||||| | | |||
Sbjct 816372 GAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 816332
>seq165
Length=418762
Score = 132 bits (146), Expect = 6e-26
Identities = 211/302 (70%), Gaps = 3/302 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| | ||||||||| || || || || ||||| || ||||| |||| |||
Sbjct 326239 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 326298
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | ||||| | | || ||||| || ||||||||||| || || | ||||| |||
Sbjct 326299 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 326358
Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|| || | ||| ||| ||||||| || |||||||| || || |||||
Sbjct 326359 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 326418
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || ||||| || ||| ||| || ||||| || | | || || || || ||||||
Sbjct 326419 TCGTTGATAATGCGGAGAACGTTGAGTCCAGCGATGGCACCAGCGTCCTTGGTGGCTTGT 326478
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || |||||| ||||| || ||||| || | ||| || | | ||| ||||| |||
Sbjct 326479 CTCTGGTTATCGTTGAAGTAAGCTGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 326538
Query 7754 AG 7755
||
Sbjct 326539 AG 326540
>seq501
Length=89838
Score = 109 bits (120), Expect = 7e-19
Identities = 240/356 (67%), Gaps = 9/356 (3%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | || || || || || || || | || || || | ||
Sbjct 41863 TCGAAATCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACGCCC 41804
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573
|| | | || | || ||||| || ||||||||||| ||||| | |||||
Sbjct 41803 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCAAGGTCGTAGACAATGA-- 41746
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| ||| || | ||| | |||| ||||| ||||| |||| ||| || || || |||
Sbjct 41745 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 41690
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | | ||| || ||| || || || || || | || || || || ||
Sbjct 41689 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 41630
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| ||||| || ||||| |||| ||||| || | |||
Sbjct 41629 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 41570
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || |||| || ||||| ||| || | ||| ||||| | ||||||
Sbjct 41569 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 41514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635128687515120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |