Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq309 156 5e-33
>seq309
Length=301579
Score = 156 bits (172), Expect = 5e-33
Identities = 1079/1719 (63%), Gaps = 55/1719 (3%)
Strand=Plus/Minus
Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTG 109565
||||||||| ||||| || |||||| ||||| ||||| | ||||| ||| || |
Sbjct 54518 CTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCT---G 54462
Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625
||| || |||||||| |||||||| | ||||| || || ||||||| ||||
Sbjct 54461 GCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCG 54402
Query 109626 TTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682
||||| |||||| |||| | | || | | |||||| | | |||||||| ||
Sbjct 54401 CTGAATGGAGCCATTGTCAGCGATGA---TGCGGTTCTTCATGTTCTCTGACCAGAGGCC 54345
Query 109683 GACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740
| |||||| | | ||| ||| |||||| || || || ||||| |
Sbjct 54344 ACGGTCGACGAGATCCTTCAGAAGCCATGG--GTTGACGACCTGGAACTCGCCAGCCAAC 54287
Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800
|| || ||| ||||| | ||||| || ||||| ||||| || ||| | |||
Sbjct 54286 ACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATC 54227
Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC--G 109858
|| | || || ||||| ||||| || || | |||||| ||| || | ||| | | |
Sbjct 54226 TGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGG 54167
Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918
| | | || | | | |||| |||| || | | | || ||||| ||
Sbjct 54166 GCGAT-CTTGCCCTTG-AGTGCGGCCCAGTCCCAGAGGTCGGTAGG---AGTCTTGCC-- 54114
Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978
|||||| || || || | |||| | | ||||| || | | ||||||| |
Sbjct 54113 -CCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAG 54055
Query 109979 ACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038
|| ||| || | |||| |||||||||| || || |||||||| || |||||||
Sbjct 54054 GACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAA 53995
Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGA 110094
|||| || || | | ||| ||||||| || | || | ||||
Sbjct 53994 AAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGA 53935
Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154
| |||| || ||||| | ||||| ||||||||||| || || | |||
Sbjct 53934 AGG----CATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTC 53879
Query 110155 CGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214
||| || | ||| ||||| ||||| |||||| | || || || ||
Sbjct 53878 TTTCGTGCCTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTG 53819
Query 110215 ACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACA 110274
|| || |||| || || ||||| | | | || || | |||| | | |||
Sbjct 53818 ACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACG 53759
Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334
|| |||| ||||||| || || |||||||| |||| ||| || | | |||
Sbjct 53758 TAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTAC 53699
Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394
|||| || || || ||||| || || ||||| ||| || | |||||||| ||
Sbjct 53698 TCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTC 53639
Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454
||| |||| || ||||| || || ||| | || || || || || ||||| | || |
Sbjct 53638 TTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCG 53579
Query 110455 AGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCG 110514
||||| || | ||||| | || | || || | | ||||| |||
Sbjct 53578 AGAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCA 53519
Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT- 110573
|| ||||| |||| || || | ||||| ||||| || ||||| || ||
Sbjct 53518 TAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGG-GCATTC 53460
Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633
|| ||| || | || | |||| | || || || || | || ||| || || || ||
Sbjct 53459 GTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 53400
Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693
|||||| | || |||| | || || |||| | ||||| | || ||||| |||
Sbjct 53399 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 53340
Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------- 110746
|| |||| || | ||||| || | |||||| || || || |||| || |
Sbjct 53339 AAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACC 53280
Query 110747 TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806
|||| | ||| | |||| |||| ||| || ||||| ||| ||| |||| | |
Sbjct 53279 TGGA-CGCTTGTTGCCACCC---TGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTA 53224
Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865
|||| || | || || | |||| || ||||| || | ||| | || | | | |||
Sbjct 53223 GCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGT-GGCC 53165
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TC 110924
| |||| ||| | ||| | ||||||||| || || ||| || ||||| ||
Sbjct 53164 CTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATC 53105
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| |||| ||| | || ||||||||||| || |||| |||| | | ||||| ||
Sbjct 53104 T-TGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGA 53046
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
| | ||| | | || || || ||| |||| ||||| || | ||||| ||| ||
Sbjct 53045 TGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGA--AG 52988
Query 111045 ACCTT--GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102
||| ||||| | ||| ||||| |||| || | | |||| ||||||||
Sbjct 52987 TACTTCAACGACATGTAGTTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATG 52928
Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162
|| | || || ||||||| ||| | ||| || | ||| | ||| ||||||| |
Sbjct 52927 CCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTG 52868
Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
||||||| ||| || ||||||| || ||||||
Sbjct 52867 AGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTAT 52829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972186380400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |