Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq474 181 2e-40 seq309 163 5e-35 >seq474 Length=994170 Score = 181 bits (200), Expect = 2e-40 Identities = 561/862 (65%), Gaps = 34/862 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||| ||||| | |||| |||||| || || |||||||||||| Sbjct 271341 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 271282 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593 | ||||| | ||| |||| || | | ||| ||||| | | ||| ||| || Sbjct 271281 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 271222 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | |||||||| || || || ||||| || || |||||||| || |||| | Sbjct 271221 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 271162 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || |||||| | |||||| || |||||||| |||||||| || Sbjct 271161 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 271102 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768 || || | ||||| ||| ||| || ||||| || || ||||| | || | Sbjct 271101 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 271045 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || | || | || ||||| ||||||||| |||| || ||||| ||||||| Sbjct 271044 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 270987 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || ||||| | ||| | | || || | | || || | | Sbjct 270986 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 270927 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 | ||||| || || ||||| ||||| ||| || || ||||| || ||||||||||| | Sbjct 270926 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 270867 Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || | | | || | |||| ||||||| || || |||||||||||| | | || ||| Sbjct 270866 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 270808 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| ||| || |||||||| || | | || || || |||| || Sbjct 270807 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 270751 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 || | || | || ||||||| ||||| || ||||||| ||||||| Sbjct 270750 CAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACA 270691 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 |||| |||||| | |||||| ||||||||||| Sbjct 270690 GACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAA 270631 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACG 26241 | || ||||| | || |||| ||| ||||| | ||| |||||| ||| Sbjct 270630 TTCGTCGCCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACA--ACG 270579 Query 26242 C--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTG 26299 | | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| | Sbjct 270578 CCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCG 270519 Query 26300 AAAAGAGGGTCGGCGACTATCA 26321 | ||| | || ||||| || || Sbjct 270518 AGAAGCGTGTTGGCGAATACCA 270497 >seq309 Length=301579 Score = 163 bits (180), Expect = 5e-35 Identities = 663/1030 (64%), Gaps = 41/1030 (4%) Strand=Plus/Minus Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429 ||| | |||||| |||||| | || || | |||| || || ||| | ||||| | Sbjct 54068 GTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAA-GCCTCAAGAGCAGCAT 54010 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 | |||||||||||||| ||| |||| || ||||||||| || || ||| |||| Sbjct 54009 GATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCA 53950 Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549 | || || | ||| | || || || || | || || | ||| ||||| | ||| | Sbjct 53949 TGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGC 53890 Query 221550 TCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609 |||| || ||||| || || || |||||| ||||| ||||| | Sbjct 53889 GGAAGTTGCTCTTTCGTGCCTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCA 53830 Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA---CT 221666 |||| | |||| ||||| |||||| || |||| | | || ||| || Sbjct 53829 GGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCT 53770 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAA-AAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 || | || ||| | ||| || | ||||| || ||||| || || Sbjct 53769 CGATGTCGACGTAGGTGGG---CAGAGCAAGCG--------AA-----GCCAGATTGCAG 53726 Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785 || || ||||| ||| | |||| |||||||| || || | || || |||| Sbjct 53725 ACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTG 53666 Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845 ||||| || || | || || || |||||| ||||| ||||||||||| || || || Sbjct 53665 ATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAA 53606 Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCAC 221904 || ||| ||||| ||| ||| | ||||| | ||| | || |||| || | || Sbjct 53605 GGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTT-TCTGAGCACGAAC 53547 Query 221905 CGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTTTT 221963 |||| | || || | | ||| | ||||| | || ||| | |||| | Sbjct 53546 CGTC----TCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGT 53491 Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCTTG 222022 ||||||| | || ||| || || || | ||| ||||| ||| |||| |||| | Sbjct 53490 CACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCC-G 53432 Query 222023 TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTG 222082 || | || ||| | |||||| ||||| || || ||||| || || | || | ||| | Sbjct 53431 TTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGC 53372 Query 222083 GTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCG 222142 | || || ||| || | ||| || | || |||| |||| | | ||| ||| Sbjct 53371 GCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCG 53312 Query 222143 TGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC 222202 ||||||||||| || |||| ||| | ||| || || ||||||||||||||||| | || | Sbjct 53311 TGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGT-CAAC 53253 Query 222203 ATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261 | | ||| | |||| ||| || || | ||||| || ||||||||| ||||| Sbjct 53252 GTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTT 53193 Query 222262 GGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCCGATAC 222317 ||||| |||||| | || |||||| | ||| || | ||| || |||| Sbjct 53192 TGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA----CCAATAC 53137 Query 222318 CACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAG 222377 | || |||| || ||||||||||| || ||||||| || || ||| || || || Sbjct 53136 CGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGC 53077 Query 222378 AGTCCTCCTT 222387 ||| ||||| Sbjct 53076 TGTCATCCTT 53067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838785729920