Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq474 251 9e-62
seq110 156 6e-33
seq165 150 2e-31
seq501 86.0 8e-12
>seq474
Length=994170
Score = 251 bits (278), Expect = 9e-62
Identities = 476/698 (68%), Gaps = 3/698 (0%)
Strand=Plus/Plus
Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349
||| | | ||| || |||||||| || || || || ||||| || || ||| | | |
Sbjct 816332 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCTTGCGTGGGTATCTTCAGA 816391
Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409
||||||| | ||||| ||| | || || || || ||||| ||||| || || | |||
Sbjct 816392 GATGATCGCATTGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 816451
Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469
||||| ||||| | || ||||| | || |||||||| || |||||| || ||||||
Sbjct 816452 GCCTTCACAGACACCGAGCGTCTGATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAAC 816511
Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529
|| || || ||||| ||||| ||||| | || || |||||||| || |
Sbjct 816512 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 816571
Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589
|| |||| || || ||| ||| | | | ||| | || | | |||| |||||
Sbjct 816572 GTGCAAGCAGACATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCTGGCAAGCCA 816628
Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649
| || || || || | || ||| |||| || || | || || || || || |
Sbjct 816629 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 816688
Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709
||| | | | |||||| ||||| || || || | | | ||| || || || |
Sbjct 816689 ATGATCCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 816748
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| || || || || || || || |||| || || || ||||| || |||||||||||
Sbjct 816749 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACAAAGGACGCC 816808
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| | ||||| || || ||| || | || |||||||| ||||| || || || |||
Sbjct 816809 GGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAATGAGCCAACTGCAGCAGCCATT 816868
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
|| || ||||| |||||||| | || | || ||||| | ||||| ||||| |||
Sbjct 816869 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 816928
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
|||||||| || ||||| || || |||| || || | ||||| ||||| || ||| |
Sbjct 816929 GGTGGTACCTTCGATGTGTCGCTGCTCACAATCGAGGAGGGTATTTTCGAGGTCAAGTCC 816988
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||||||||| ||||| | |||||||| || |||||
Sbjct 816989 ACTGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGA 817026
>seq110
Length=1282662
Score = 156 bits (172), Expect = 6e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || || |||||||||||||||||||| ||||| ||||| || | || |
Sbjct 75237 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 75296
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || || ||||||||||||||||| || |||||||| | |||||||| || |||
Sbjct 75297 AAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTTGCAGGCAAA 75356
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| || || || || ||||| | || |||||| | || |||||| ||||| ||
Sbjct 75357 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAT 75416
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | ||||| ||||||
Sbjct 75417 CTCGTCCTCCGTCTTCGTGGTGGT 75440
Score = 150 bits (166), Expect = 2e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || || || || || || |||||||||||||| ||||
Sbjct 75436 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 75495
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| ||||| ||||| || |||| | ||||| || || ||||| || || ||||| |
Sbjct 75496 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 75555
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || |||||||| || || ||||| || ||||| ||||| || | || |
Sbjct 75556 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACT 75615
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || || || || ||||| ||| | || || | || || ||||||
Sbjct 75616 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 75668
>seq165
Length=418762
Score = 150 bits (166), Expect = 2e-31
Identities = 197/272 (72%), Gaps = 3/272 (1%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || |||||||||| ||| || |||| || || |||||||||| ||| ||
Sbjct 326510 ACCGTCCCAGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 326451
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| ||| | |||||||| || ||||| || ||||| || || ||||||
Sbjct 326450 GCTGGACTCAACGTTCTCCGCATTATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 326391
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| ||| | || ||| || | |||| ||||| |||||||||
Sbjct 326390 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 326331
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| ||||| | ||| | || ||| | ||| || |||||||| |||
Sbjct 326330 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 326271
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| || ||| | |||||| | ||||||||
Sbjct 326270 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 326239
Score = 111 bits (122), Expect = 2e-19
Identities = 252/375 (67%), Gaps = 8/375 (2%)
Strand=Plus/Minus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118
||||| ||||| || | || || || || |||||||| |||||||| || | ||||
Sbjct 326059 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 326002
Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178
||||||| | | || || ||||| | || || || || ||| | || | || |
Sbjct 326001 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 325942
Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236
||||||| ||||| || || | ||| | | || | || | || | || ||
Sbjct 325941 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 325884
Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296
|| || || || |||||| || || ||| |||||||| || ||||| |||||
Sbjct 325883 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATTGTGCTTGT 325824
Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356
|| || || || |||||||| ||||| || || | || || ||||||||| ||
Sbjct 325823 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 325764
Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416
| | | || | |||||||| ||||| || || || || ||||| |||||||||||
Sbjct 325763 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGTGCCGCCGTTCAGGC 325704
Query 196417 TGCTATTCTCTCAGG 196431
| ||| ||||| ||
Sbjct 325703 CGGTATCCTCTCTGG 325689
>seq501
Length=89838
Score = 86.0 bits (94), Expect = 8e-12
Identities = 220/331 (66%), Gaps = 13/331 (4%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||| || || || | | | || ||| || | | ||||| || ||
Sbjct 41541 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 41600
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || | || || || || |||||||||| | || ||
Sbjct 41601 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 41660
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| || | | |||| ||||| || || || || | || || || ||
Sbjct 41661 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 41720
Query 195842 GACAAGA---ACAAGG-ACG-AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896
||||||| |||||| ||| |||| |||| ||| || || ||||||||||
Sbjct 41721 GACAAGACCGACAAGGAACGCCAGAT-------CATTG-TCTACGACCTTGGTGGTGGTA 41772
Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956
| || |||||||| | | | | | || || | ||||| || |||| || || |
Sbjct 41773 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGCGTGTTCGAGGTTCAGGCAACGGCCG 41832
Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|||| || ||||| |||||||| ||||||||
Sbjct 41833 GTGACACCCATCTTGGTGGTGAGGATTTCGA 41863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657858140340960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |