Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq309 147 6e-30 seq491 118 3e-21 seq4 96.9 1e-14 >seq309 Length=301579 Score = 147 bits (162), Expect = 6e-30 Identities = 555/865 (64%), Gaps = 7/865 (1%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||||| ||||| |||||||||||||| | |||||||||||| || | | Sbjct 53692 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 53633 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| |||||| | || || || ||||| |||| || || ||||| Sbjct 53632 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 53573 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | ||| || || | ||||||| |||||| | Sbjct 53572 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 53513 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 |||||| | | || |||||||| ||| ||| |||||||| | | |||| Sbjct 53512 TCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGG 53453 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938 || | || | |||| | || | | | ||||||| |||||| | ||| ||| Sbjct 53452 CACATTAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 53394 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 | ||| ||||| | || | || || || | || || ||||| || || || Sbjct 53393 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 53334 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055 | ||| | | | || | || ||||| || || || |||||| ||| | Sbjct 53333 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 53274 Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 | | ||||||||||| || || || || ||||| || ||| |||| | |||||| || | Sbjct 53273 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 53214 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 || ||| ||||| ||||| || || |||| ||| | || || | | | | || || Sbjct 53213 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 53154 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 || ||| || |||||||| || | || || || || ||| ||| | |||| Sbjct 53153 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATC 53094 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | | ||||| ||||| ||||| | ||| | | | |||| || || || | Sbjct 53093 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 53034 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 |||| || ||||| |||| ||||| || | ||||| | || ||||| ||||| Sbjct 53033 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 52974 Query 156356 ATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414 || | |||||||| | || | |||| | ||||||||| | || || || | Sbjct 52973 GTAGTTATATGTCTCGAT-CGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACAC 52915 Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474 ||| ||| || || || | ||| ||| | |||||||||| |||||||||| | Sbjct 52914 GCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATC 52855 Query 156475 GTTCCAGAGTTTTAAACCCGAAATA 156499 | |||||||| || || ||||| || Sbjct 52854 GCTCCAGAGTCTTGAAGCCGAAGTA 52830 >seq491 Length=113503 Score = 118 bits (130), Expect = 3e-21 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| | ||||||| | ||| | || ||||||||| || |||||||| | || Sbjct 21433 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 21492 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| ||||||||||||| || |||||||| | ||||| Sbjct 21493 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 21552 Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740 ||| || |||| | | | | ||| |||| |||||||| | | | ||||| | || Sbjct 21553 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCTAGATGCAGGCGAGTAGT 21610 Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800 || ||||| ||| || |||||| | || || ||||| | |||| |||||| || | Sbjct 21611 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 21670 Query 302801 C 302801 | Sbjct 21671 C 21671 >seq4 Length=52262 Score = 96.9 bits (106), Expect = 1e-14 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| |||||| || || || |||||||| ||||| ||| | || Sbjct 34324 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 34383 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| || | || || ||| || | |||| || ||||| || Sbjct 34384 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 34442 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| |||||||||||||| Sbjct 34443 TCCGTGACGAGATGCAAACTTATCACCAAT 34472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807831730566