Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq474 159 5e-33
seq143 156 7e-32
seq11 127 3e-23
seq309 89.7 8e-12
>seq474
Length=994170
Score = 159 bits (176), Expect = 5e-33
Identities = 322/476 (68%), Gaps = 4/476 (1%)
Strand=Plus/Minus
Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979
|| |||||||||||||||| | ||||||||||| || |||||| | || | |
Sbjct 68379 GGGTCGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAACCATCG 68320
Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039
|||||| | ||| || ||||||||||| || | | | ||||| ||
Sbjct 68319 AACGCCTCAAAATCATCGCCAAAGATGGCAACATGCCACACGTAATCATCTCGGGCATGC 68260
Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099
|||| | ||||| ||||| || ||||| |||||| ||||| ||| | |||
Sbjct 68259 CCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCCCAGCCT 68200
Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159
| | || ||||| ||||||||||| || || ||||||||||| | |||||||| || |
Sbjct 68199 ACAAAGAAGCCGTCCTCGAACTCAACGCCTCCGACGAGCGCGGAATCGACGTCGTACGAA 68140
Query 2019160 GAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGT 2019217
|||||| || || ||| ||||| || || || |||| || || ||| |
Sbjct 68139 ACCGCATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCAGAAGAT 68082
Query 2019218 GATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGAC 2019277
| || || || || || || || | || || | || |||||||| || || ||
Sbjct 68081 TGTAATTCTAGACGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCGCCGAAC 68022
Query 2019278 CATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGT 2019337
||||||| |||| || |||||| || || || | ||||||||| ||| | |
Sbjct 68021 GATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCCTGCAACCAATCGAACAAAAT 67962
Query 2019338 CATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACG 2019393
|||||| | ||||| || ||||| |||||||||| ||||| ||||||||||
Sbjct 67961 CATCGAGCCTCTCCAATCGCGCTGCGCAATCTTGCGCTACGCGCGACTCACCGACG 67906
Score = 122 bits (134), Expect = 1e-21
Identities = 177/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||||| || ||| |||||| |||||||||||||| | |
Sbjct 270483 TGACACCAGCCTTCTGGTATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 270542
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || |||||| | ||| ||||||| | |||| ||||| | ||||
Sbjct 270543 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 270602
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | || ||||| |||||||||||||||||||| || |||||||| | |||||||
Sbjct 270603 GTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 270662
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | ||| || || | || | | ||||| | ||||||| ||||||||
Sbjct 270663 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 270722
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 270723 CGGTGATGAT 270732
>seq143
Length=420940
Score = 156 bits (172), Expect = 7e-32
Identities = 177/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| |||
Sbjct 255669 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 255728
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| ||||||| |||||||| ||||| | ||| || |||||| || |
Sbjct 255729 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 255787
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| ||| ||| |||| ||||||||||| || |||||||
Sbjct 255788 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 255847
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| ||||| | ||||||||| || ||| ||||| ||||||||||| ||
Sbjct 255848 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGAAC 255902
>seq11
Length=586967
Score = 127 bits (140), Expect = 3e-23
Identities = 106/130 (82%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||||||||||||| | || |||||| | || ||||| | || |||
Sbjct 53981 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 53922
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
||||| || |||||| | |||||||||||||||||||| || ||||| ||||| || |||
Sbjct 53921 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCCGAAGAGATCCGAAAGACGTTCAAC 53862
Query 2035752 ATCAAGTACG 2035761
||| || |||
Sbjct 53861 ATCCAGAACG 53852
>seq309
Length=301579
Score = 89.7 bits (98), Expect = 8e-12
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661
||||||| || || ||||| | | ||| || || | ||| |||||||| ||| |||
Sbjct 54315 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 54256
Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721
| ||| | |||| | ||||| ||||||||| |||| ||| || ||||| ||||
Sbjct 54255 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 54197
Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780
||||| ||||||||||||| |||| || | || | || || || ||| |||||||
Sbjct 54196 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 54138
Query 2069781 CCAGCGGCCG 2069790
|||| || ||
Sbjct 54137 CCAGAGGTCG 54128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916191297977402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |