Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq474 174 2e-37 seq309 95.1 2e-13 >seq474 Length=994170 Score = 174 bits (192), Expect = 2e-37 Identities = 357/515 (69%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 271342 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 271284 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 271283 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 271227 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 271226 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 271168 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 271167 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 271108 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 271107 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 271048 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 271047 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 270991 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 270990 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 270936 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || ||| Sbjct 270935 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 270877 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 270876 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 270842 Score = 145 bits (160), Expect = 1e-28 Identities = 322/483 (67%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| |||| ||||| ||| | |||||| ||| || || || || || | || Sbjct 67897 CGACTTGCCCGTCGGTGAGTCGCGCGTAGCGCAAGATTGCGCAGCGCGATTGGAGAGGCT 67956 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | ||| ||||||||| | ||| || || ||||| || | | ||| Sbjct 67957 CGATGATTTTGTTCGATTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 68016 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || || || ||||| || || | | || | || || || ||||| || | Sbjct 68017 CCATCGTTCGGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAGAA 68076 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 | | ||||| || |||||| || || ||| ||||| ||| | |||||| Sbjct 68077 TTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATGC 68136 Query 333087 TCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGT 333146 || || |||||||| | ||||||||||| || |||||||||||||| ||||| || | Sbjct 68137 GGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCTT 68196 Query 333147 CGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGC 333206 | ||| | || ||||| |||||| ||||| || ||||| ||||| | | Sbjct 68197 TGTAGGCTGGGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTC 68256 Query 333207 CGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGT 333266 ||||| |||| | | | || ||||||||||| || ||| | |||||| Sbjct 68257 CGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGGC 68316 Query 333267 AGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGA 333326 | | || | ||||||||| ||||||||||| | | |||||||||||||||| Sbjct 68317 GTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCGA 68376 Query 333327 TCC 333329 || Sbjct 68377 CCC 68379 Score = 95.1 bits (104), Expect = 2e-13 Identities = 176/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| |||||||||| ||||||| | ||||| | | || | || || | Sbjct 270732 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 270673 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | || |||||||| | ||||||| || ||||||||||| |||||||| |||| Sbjct 270672 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 270615 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || ||| |||||| | ||||| |||| | ||||||| ||| | ||| Sbjct 270614 TACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 270556 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || ||||| | |||||||||||||| |||||| || | |||||| ||| Sbjct 270555 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAATACCAG 270496 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 270495 AAGGCTGGTGTCA 270483 >seq309 Length=301579 Score = 95.1 bits (104), Expect = 2e-13 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 54128 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 54186 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 54187 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 54246 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 54247 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 54305 Query 263050 GTGGTCAACC 263059 || ||||||| Sbjct 54306 GTCGTCAACC 54315 Score = 89.7 bits (98), Expect = 7e-12 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153 || |||| || ||| ||| ||| || | |||||||||||| || | ||| | |||||| Sbjct 53562 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 53621 Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212 ||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || | Sbjct 53622 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 53680 Query 262213 GTGCACCGAGATC 262225 |||||| |||||| Sbjct 53681 GTGCACTGAGATC 53693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177761237947916