Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq110 143 3e-29
seq309 102 8e-17
seq443 84.2 2e-11
>seq110
Length=1282662
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| |||| ||| | ||| || ||||| ||||| || ||||||||||| |
Sbjct 75895 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 75836
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || ||||| ||||| || || || | ||||||||| || || ||
Sbjct 75835 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 75776
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || ||| ||||| ||| | |||||||| ||||||||
Sbjct 75775 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 75716
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || ||||| | || || ||||||||||||||
Sbjct 75715 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 75669
Score = 136 bits (150), Expect = 4e-27
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||| ||||| || |||||||||||| | |||| || ||| |||
Sbjct 75421 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 75362
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||||||||||||||||||||| || ||||| || || || |||||||| || || ||
Sbjct 75361 AGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 75302
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||||||||| || || ||||| |||||||| ||
Sbjct 75301 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 75242
Query 134685 CCGGT 134689
|||||
Sbjct 75241 CCGGT 75237
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || || ||||| || || ||||||||||||
Sbjct 75667 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 75608
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || |||||||| |||||||||||||||| |||||||| || || ||
Sbjct 75607 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 75548
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | |||||| || || ||
Sbjct 75547 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 75488
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | ||| || ||||| || |||||
Sbjct 75487 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 75441
>seq309
Length=301579
Score = 102 bits (112), Expect = 8e-17
Identities = 348/533 (65%), Gaps = 21/533 (4%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||| ||| | |||| ||||| || ||||||||||| ||||||||||| || || |
Sbjct 52899 CAACAGATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATC 52958
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTT---T 7680
|| || || | ||||| ||||| | || || || |||||||| || | || |
Sbjct 52959 GAGACATATAACTACATGTCGTTGAAGTACTTCACACATGCTTCGCCAACACTTTTCAGT 53018
Query 7681 GCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740
|| | | || | ||| || | | || || || ||| | ||||| || |||
Sbjct 53019 GCTGGTACCCCACAGGCG---CAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGAC 53075
Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGG 7799
||||| || || || ||| | || || | ||| || |||| || ||||| ||| ||
Sbjct 53076 AGCATTGATGGTATCTACGATACCCT-CAAGATATGTGCCATGATCTCCAAGAACGCTGG 53134
Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859
||| || ||||| | || || || | | |||| || ||| | ||| ||
Sbjct 53135 CGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCATACATTGGCGGCACAAA 53194
Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919
||| | | ||| |||| | | || ||| | || || | ||| ||| | | || | ||
Sbjct 53195 CGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGT 53254
Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976
|||||||| || ||||| ||| || ||||||||| | ||||||||||||||
Sbjct 53255 TGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTGGCACGC 53314
Query 7977 GGACATTTACGCAGTGC-TAAATCTGCGTCGCAA----CATGGGTTGCGAAGACAGCAAA 8031
||| | | ||||| | | | || |||||| ||||| | |||||
Sbjct 53315 AGAC-GTCATGCAGTTCATGGACCT---TCGCAAGAACCATGGAAAG-GAAGAAGTTCGT 53369
Query 8032 GCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084
||||||||| | |||| || | ||| | |||||||| |||||| ||| ||
Sbjct 53370 GCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGT 53422
>seq443
Length=1028484
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | |||| || || || | ||| || || || || |
Sbjct 778395 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 778454
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||||||||||||| || || || || || || || || || || || ||||| ||
Sbjct 778455 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 778514
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||| ||| || || ||||| || ||||| || || || | || || ||||
Sbjct 778515 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 778574
Query 134704 A 134704
|
Sbjct 778575 A 778575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395127545360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |