Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq110 143 3e-29 seq309 102 8e-17 seq443 84.2 2e-11 >seq110 Length=1282662 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| |||| ||| | ||| || ||||| ||||| || ||||||||||| | Sbjct 75895 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 75836 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || ||||| ||||| || || || | ||||||||| || || || Sbjct 75835 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 75776 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || ||| ||||| ||| | |||||||| |||||||| Sbjct 75775 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 75716 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| | || || |||||||||||||| Sbjct 75715 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 75669 Score = 136 bits (150), Expect = 4e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||| ||||| || |||||||||||| | |||| || ||| ||| Sbjct 75421 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 75362 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||||||||||||||||||||| || ||||| || || || |||||||| || || || Sbjct 75361 AGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 75302 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||||||||| || || ||||| |||||||| || Sbjct 75301 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 75242 Query 134685 CCGGT 134689 ||||| Sbjct 75241 CCGGT 75237 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || ||||| || || |||||||||||| Sbjct 75667 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 75608 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || |||||||| |||||||||||||||| |||||||| || || || Sbjct 75607 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 75548 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||| || || || Sbjct 75547 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 75488 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | ||| || ||||| || ||||| Sbjct 75487 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 75441 >seq309 Length=301579 Score = 102 bits (112), Expect = 8e-17 Identities = 348/533 (65%), Gaps = 21/533 (4%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 ||||| ||| | |||| ||||| || ||||||||||| ||||||||||| || || | Sbjct 52899 CAACAGATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATC 52958 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTT---T 7680 || || || | ||||| ||||| | || || || |||||||| || | || | Sbjct 52959 GAGACATATAACTACATGTCGTTGAAGTACTTCACACATGCTTCGCCAACACTTTTCAGT 53018 Query 7681 GCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740 || | | || | ||| || | | || || || ||| | ||||| || ||| Sbjct 53019 GCTGGTACCCCACAGGCG---CAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGAC 53075 Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGG 7799 ||||| || || || ||| | || || | ||| || |||| || ||||| ||| || Sbjct 53076 AGCATTGATGGTATCTACGATACCCT-CAAGATATGTGCCATGATCTCCAAGAACGCTGG 53134 Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859 ||| || ||||| | || || || | | |||| || ||| | ||| || Sbjct 53135 CGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCATACATTGGCGGCACAAA 53194 Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919 ||| | | ||| |||| | | || ||| | || || | ||| ||| | | || | || Sbjct 53195 CGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGT 53254 Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976 |||||||| || ||||| ||| || ||||||||| | |||||||||||||| Sbjct 53255 TGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTGGCACGC 53314 Query 7977 GGACATTTACGCAGTGC-TAAATCTGCGTCGCAA----CATGGGTTGCGAAGACAGCAAA 8031 ||| | | ||||| | | | || |||||| ||||| | ||||| Sbjct 53315 AGAC-GTCATGCAGTTCATGGACCT---TCGCAAGAACCATGGAAAG-GAAGAAGTTCGT 53369 Query 8032 GCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 ||||||||| | |||| || | ||| | |||||||| |||||| ||| || Sbjct 53370 GCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGT 53422 >seq443 Length=1028484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| || || || | ||| || || || || | Sbjct 778395 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 778454 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||||||||||||| || || || || || || || || || || || ||||| || Sbjct 778455 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 778514 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | |||||| ||| || || ||||| || ||||| || || || | || || |||| Sbjct 778515 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 778574 Query 134704 A 134704 | Sbjct 778575 A 778575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395127545360