Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq309 219 5e-52 seq474 123 3e-23 >seq309 Length=301579 Score = 219 bits (242), Expect = 5e-52 Identities = 1113/1748 (64%), Gaps = 47/1748 (3%) Strand=Plus/Minus Query 117836 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 117895 |||||| |||||||| || |||||||| || ||||||| || | ||||| || Sbjct 54620 TCGGAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCAGCGAAGTGCATGCTGGT 54561 Query 117896 CAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | |||||| || |||| || ||||| || || || || ||||| || Sbjct 54560 AATCTTGCCCATGGTTGGCTCTTTCATGTGGATGTTCAAGCTCTGAGACTGGTCGATAAA 54501 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGT 118012 || || || || ||||| | ||| || || |||| ||||| || || Sbjct 54500 AGCACCACGGTCAGCAGCCATCTG---CACGATGTTACGCTGGCTGATCTCCCAGACGGT 54444 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | ||||||| ||| | || ||||| || | ||| || ||||| ||| | Sbjct 54443 CTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGAGCCATTGTC 54384 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 || ||| | | |||||| | || ||||||||| ||| | |||||||| || Sbjct 54383 AGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGAGATCCTTCAG 54324 Query 118133 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATT 118189 || ||| | |||| || ||||| || || | || | ||| || || || Sbjct 54323 AAGCCATGGGT--TGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAGTAAATGTT 54267 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | | ||||||||||| |||||||| || |||| ||| || | || |||||||| || Sbjct 54266 GCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGG 54207 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTT---CCCTAATGCGTTCCTTGAG 118306 ||| || || | |||||| ||| || | ||| | | | | ||| ||||||| Sbjct 54206 CATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC---CCTTGAG 54150 Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTTG---TCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 ||| ||||||| || | | | ||| ||| ||||| || ||||||| Sbjct 54149 TGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCC---CACATGTCGTACTGGAGCTC 54093 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 || || || |||| || || ||||||| || || || ||| || | || Sbjct 54092 GCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTC 54033 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | ||||| || || || ||||| || || |||||||| | || | |||| Sbjct 54032 GCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTT 53973 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 |||||| || || || | | ||| | || |||| || ||||| | ||| Sbjct 53972 GGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGAC 53913 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAA 118602 ||| || ||||| || || || | | || ||| || || ||| || || || Sbjct 53912 ACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACCGGGTAGT 53854 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | || | ||||| | | || || || ||||| || || |||| || ||||| | Sbjct 53853 AGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTT 53794 Query 118663 TTTCGTAATCAAAA-CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | | | | |||||| | || |||| | ||| || | || || || | || ||| Sbjct 53793 TCTTGAAGTCAAAAACCTCGT-TCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCC 53735 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 ||||| || |||| | ||||||| | ||| |||||| || || || |||||||| || Sbjct 53734 AGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTA 53675 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || ||||| |||||||| | ||||| || || ||| ||| || |||||||| Sbjct 53674 GAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAC 53615 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCA 118901 || ||| | || || || ||||| || || | || ||||||||| | ||| | | | Sbjct 53614 AGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGA 53555 Query 118902 GCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | || || | | | || ||| ||| || ||| || | | ||| Sbjct 53554 GCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAAC 53495 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTG 119020 || ||||| | | || || || || || || || |||| || | |||| ||| Sbjct 53494 TCGTCACCGTAGACATCCGACAGACCAGG-GCATTCGTTGGGGCACATTAGAGTCCAAGT 53436 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080 || || || || |||| ||| ||||| || || |||||||| || |||| | ||| Sbjct 53435 GCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATC 53376 Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || ||| ||||||| | || || || || | |||| || | ||||| || Sbjct 53375 GCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTC 53316 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTG 119194 ||||||||||| || ||||| | || | | | ||| |||| ||| |||| Sbjct 53315 TGCGTGCCACGGCTCAAGGTAGATGGCAAAAG-CACCTG--GACGCTTGTTGCCACCCTG 53259 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 || || || | |||||| ||| | || || |||||||| | | ||| | |||| Sbjct 53258 GTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 53199 Query 119255 GCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312 ||| ||||| || | ||| | ||| || |||| |||| | ||| | || | |||| Sbjct 53198 GCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATGAAGACCA 53141 Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372 ||||| || || ||| ||||| || || | |||| | ||||||| ||||| Sbjct 53140 ATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCA 53081 Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACC 119431 || |||| |||| | || | | ||||||| | | || | |||| || ||||| Sbjct 53080 ATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCG-CCTGTGGGGTACC 53022 Query 119432 AGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG-GACATCTTGTCGTAGG 119490 ||| |||| || ||||| | || || |||| ||| | ||||| | || || | Sbjct 53021 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGTTATATG 52963 Query 119491 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550 |||| | | || |||||||||||||||||| |||| | || ||||| | ||| | Sbjct 52962 TCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCT 52903 Query 119551 ATTGGGGT 119558 ||| ||| Sbjct 52902 GTTGCGGT 52895 >seq474 Length=994170 Score = 123 bits (136), Expect = 3e-23 Identities = 528/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| ||| ||| || |||||||| Sbjct 270500 TATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 270559 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | | ||| || | | | | | | || Sbjct 270560 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT------ 270613 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || ||||| | |||| | |||||||| | ||||| | | |||||| || | || Sbjct 270614 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 270673 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || ||||| || ||||| | |||| ||| ||| || || || || | |||| Sbjct 270674 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 270733 Query 129962 GCGTG---AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 || || || || || | || | || || | | ||| || ||| Sbjct 270734 CTCTGCACAAGGGCCTG-GTTC--GGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 270790 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || ||| | ||||| |||||||||||||| || |||||||| || || | | Sbjct 270791 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 270850 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 |||||||| || ||||||| |||||| || ||| ||| || |||||||||||||| ||| Sbjct 270851 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 270910 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197 || || || || |||| |||||| || || | || | |||| | || ||| Sbjct 270911 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCA 270969 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 130256 || |||||| | ||||| | ||| || |||| | | | ||| || || || Sbjct 270970 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 271029 Query 130257 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316 || ||| | || ||| || ||||||| |||| ||||| |||||||| ||| Sbjct 271030 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 271088 Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| | | ||| || | ||| | ||||||| | || || || ||||| Sbjct 271089 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 271147 Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434 |||||| || || | | || ||||| ||||| |||||||| | || || Sbjct 271148 ACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAA 271206 Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491 || || |||| | ||||| |||| | ||||| | | | |||||||| Sbjct 271207 GAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTC 271266 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || ||||||||||| ||||| | |||||| || ||||| Sbjct 271267 GTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 271305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431195632080