Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq309 226 3e-54 seq320 109 6e-19 >seq309 Length=301579 Score = 226 bits (250), Expect = 3e-54 Identities = 477/698 (68%), Gaps = 24/698 (3%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || || ||||||| || |||| |||||||| || | ||| | Sbjct 52983 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 53042 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 | ||||||| ||||||| |||||||||||| || || || |||||||| || ||| Sbjct 53043 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 53102 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445 ||| |||||| ||||||||| | || ||||| ||| | || || || ||| | Sbjct 53103 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 53161 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 | | || | ||| || || || || |||||| || | || | || || || Sbjct 53162 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 53221 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564 ||| || |||| ||||||||| || || ||||| |||||||||| ||||| | ||| Sbjct 53222 GCTACGAGTCTACAACAACACTGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 53281 Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624 | | || ||||||||||| |||||||||||||| ||| | ||| |||| | || || | Sbjct 53282 TG-CTTTTGCCATCTACCTTGAGCCGTGGCACGCAGACGTCATGCAGTTCATGGACCTTC 53340 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682 | ||| || || | ||||| | || ||| || || |||| ||| ||||| ||||| Sbjct 53341 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 53398 Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741 ||| || ||||| ||||| || || || ||| | | | | || || |||||||| | Sbjct 53399 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTAATGTGCCCCA 53457 Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801 |||| ||||| || || || |||||||||||| ||||| || ||| |||| || ||| Sbjct 53458 ACGAATGCCCTGGTCTGTCGGATGTCTACGGTGACGAGTTCAAGGAGCTGTA-CGAGCGT 53516 Query 53802 -------ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGAT 53854 | || ||||||| ||| ||| || | | ||||| || Sbjct 53517 TATGAGAGAGAAGGCAAGGGCCG------TGAGACGGTTCGTGCTCAGAAAATATGGTAT 53570 Query 53855 GCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTC 53914 || || ||| || ||| ||||| || || || | ||| |||||||| | | | Sbjct 53571 GCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAGGACGCCGCC 53630 Query 53915 AACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||| ||||||||||||||||| | ||| |||||| Sbjct 53631 AACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAA 53668 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| || ||||| ||||| |||||||| || ||||| | |||||||||||| Sbjct 54180 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 54239 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 |||||| |||||||| ||||| | |||||| ||| Sbjct 54240 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 54275 >seq320 Length=289873 Score = 109 bits (120), Expect = 6e-19 Identities = 183/265 (69%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || |||||||| || || || || || ||||| |||||||||| || ||||| || | | Sbjct 80060 CCGGTTCCGATGCCATCAGCGCCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 80119 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | | |||||||| ||| |||| | |||| ||| | || ||| || Sbjct 80120 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGA 80179 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | || || | | | || | || | ||| | |||||||||| || || ||| Sbjct 80180 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 80239 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || ||||| || ||||| | || || | ||||||||||| | || |||| |||| Sbjct 80240 TCGTTGCCGCCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATATTCATGTTG 80299 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416 |||| ||||| ||||| ||||||| Sbjct 80300 TTGGAACCCACGAAGTTCTGAGCCA 80324 Score = 98.7 bits (108), Expect = 1e-15 Identities = 279/424 (66%), Gaps = 10/424 (2%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| |||||||| || || ||||||| ||| |||||||||| || || | || | | Sbjct 80060 CCGGTTCCGATGCCATCAGCGCCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 80119 Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 ||||| || | | ||| ||||| || | ||| ||| | | | || | | Sbjct 80120 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 80178 Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050 || || ||| | ||| ||| ||| || | |||| | ||||| || | |||| Sbjct 80179 ATGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 80234 Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110 ||||||| ||||| ||| ||| || | |||||| | ||| |||||||||| || | Sbjct 80235 CCGCATCGTTGCCGCCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATATTCA 80294 Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170 |||||||| |||||||| |||||||||| | | || || |||||| | | Sbjct 80295 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 80354 Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230 |||||| | || || || | | | || | || |||| || | ||||||| | | Sbjct 80355 CACCGTACGGGTATGCGGTGAGACCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 80414 Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290 | || ||||||| || ||| | ||| || || || ||||| || ||||| | Sbjct 80415 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 80474 Query 152291 CGTC 152294 |||| Sbjct 80475 CGTC 80478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132 |||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || || Sbjct 82105 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 82163 Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||||||| ||||||||| || | |||||| || ||||| | |||||| || Sbjct 82164 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 82218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212456776400