Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07- 28] 518 sequences; 31,898,548 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq474 154 2e-32 seq309 123 3e-23 >seq474 Length=994170 Score = 154 bits (170), Expect = 2e-32 Identities = 346/516 (67%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || |||||||| |||| ||| || |||||||| || ||||| || || || || Sbjct 270827 TCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA 270886 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||||||||| ||||| || || || ||||| |||||||| | || | || | Sbjct 270887 AAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAAT 270946 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | | |||| ||||| || ||||| ||||||||| | | || || Sbjct 270947 GTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGG 271006 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAA-GtttttttCATTGCTATCTTTAACGTAAGTATC 48418 || | || || ||||| || || | ||| | | ||| || | | ||| ||||| Sbjct 271007 ATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTTTGGC-TCGCTGATGTATGTATC 271065 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 || | ||| ||| | |||||||| || || || || ||||| || ||||| || Sbjct 271066 GATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAA 271125 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 |||| || || | |||||| ||||| | | || || || | | ||||| || || Sbjct 271126 GCATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGAC 271185 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || ||||| || || || ||||| | || ||| || || || ||||| | Sbjct 271186 AATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTC 271245 Query 48599 AGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 | ||| || |||||||| | || ||| || || | ||| | || ||||||||||| Sbjct 271246 GTTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 271305 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||| || ||||| ||||| | |||||| Sbjct 271306 GAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 271341 >seq309 Length=301579 Score = 123 bits (136), Expect = 3e-23 Identities = 588/924 (64%), Gaps = 18/924 (2%) Strand=Plus/Minus Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789 || ||||| || || | |||| | ||||| ||||| ||||| | ||||||||||| Sbjct 53695 ATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTG 53636 Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849 ||| | |||||| || ||||| || || || ||||| || |||| | |||| | Sbjct 53635 CGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGA 53576 Query 77850 ATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTA-TCGCCTCTCTCTTTCAT 77907 |||| | ||| | ||| ||| | | | | | |||| ||||| |||| Sbjct 53575 ATAGCATACCATATTT-TCTGAGCACGAACCGTCTCACGGCCCTTGCCT-TCTCTCTCAT 53518 Query 77908 ATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCAT 77967 | | || ||| | || || || || | ||||| || ||||||||||| | Sbjct 53517 AACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGT 53458 Query 77968 TTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTA 78027 | |||||||| | | ||| || | | | || || | |||||||||||| || | Sbjct 53457 TGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAA 53398 Query 78028 TCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAA 78087 |||| ||||| || | ||| || | | | |||||| ||||| ||||| || Sbjct 53397 TCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAA 53338 Query 78088 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAG 78147 | || | |||| ||| | || | ||||| || || || || || || | | | || | Sbjct 53337 GGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTG 53278 Query 78148 GTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTG 78207 | || || || || ||||| || | || | || ||||| || || |||| | ||||| Sbjct 53277 GACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTG 53218 Query 78208 GAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267 | | || |||||| ||||| || ||||| || ||| || || | || | || | Sbjct 53217 GTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGT 53158 Query 78268 TACTA--ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325 | | ||| | | || || || || || |||| || || | || || || | Sbjct 53157 TGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 53100 Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATG----TTAAGAAGAAAACAGCTAG 78381 |||||||||||||| || || ||||||||| ||||| |||||| | ||||| Sbjct 53099 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 53040 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 || || || || ||| | || | ||| || || ||||| || || | | Sbjct 53039 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 52984 Query 78442 TTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 | || | |||| || ||||| || || |||| ||| ||||| ||||| || Sbjct 52983 TCAACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCG 52925 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAAC 78560 || || |||||||| | ||| || || ||||| || | ||| || ||| | | Sbjct 52924 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGA 52865 Query 78561 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAA 78620 | ||||||| |||| ||| || || || || || | ||| ||||| | || || Sbjct 52864 AGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAG 52805 Query 78621 ATAATAACAGAATTTAGTTTATCT 78644 | ||| | || || || | |||| Sbjct 52804 ACAATGGCCGAGTTCAGCTCATCT 52781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664302019520