Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq474 134 2e-26
seq309 116 5e-21
>seq474
Length=994170
Score = 134 bits (148), Expect = 2e-26
Identities = 546/851 (64%), Gaps = 12/851 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| |||||||| || ||||| |||||||| || || || ||||| ||| || || ||
Sbjct 270494 TTCTGGTATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 270553
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || || | || || | || || || | | | | |
Sbjct 270554 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT 270613
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| || |||||||| || || | ||| | || ||||| || | ||
Sbjct 270614 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 270673
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
||| || ||||| || || | ||||| || || || ||||| || || | || ||
Sbjct 270674 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 270732
Query 46579 GATGTT-ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | | || ||| | || | | ||| ||| |||| | || || ||
Sbjct 270733 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 270792
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||| ||||| | || | ||||| || ||||||||||| | |||
Sbjct 270793 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 270852
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| ||||| || || ||||| || ||||| || ||||||||||| ||||| || || ||
Sbjct 270853 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 270912
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814
|| || || ||||| | || | || | | | | || | | ||||| |
Sbjct 270913 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 270972
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||| | | || || || | || || ||||| || || |
Sbjct 270973 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 271032
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
|| | | || | | |||||||| || | ||| ||| | || || ||
Sbjct 271033 TGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTG 271092
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
||||| || || ||||| || ||||| || |||| ||| || | ||||| |||||
Sbjct 271093 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC 271152
Query 46995 TGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053
| | || || || ||| | ||||| || || || ||||| || || || ||||
Sbjct 271153 AGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 271211
Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTCCAGTCATTG 47109
| | || ||| || || || ||| ||| || |||| | || |||||||| | |
Sbjct 271212 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC-GCTTGTTCCAGTCGTGG 271270
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | || ||||||||||||||||| ||||| || ||||| |||
Sbjct 271271 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 271330
Query 47170 ATATTCCATAT 47180
|| | ||||||
Sbjct 271331 ATTTGCCATAT 271341
>seq309
Length=301579
Score = 116 bits (128), Expect = 5e-21
Identities = 613/977 (63%), Gaps = 30/977 (3%)
Strand=Plus/Minus
Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATC 76330
||||| | || || ||||| || || || ||||||| | | | || | || |||
Sbjct 53749 AGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATC 53690
Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390
|| ||||| | |||| | |||||| || |||||||| | ||||||||||| |||
Sbjct 53689 TCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTG 53630
Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGAT 76450
| |||||| || |||| || || || || || || |||| | |||| |||||
Sbjct 53629 GCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCA 53570
Query 76451 TTCCAGACGACTCTAGCTTTTATTATA--GATTTGTATCGCTTC--------TCTCTTTC 76500
| ||| | |||| | | || || || | | ||||| ||
Sbjct 53569 TACCATA----------TTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTC 53520
Query 76501 ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTC 76560
||| | || | | | || || || || | ||||| || |||||| |||||
Sbjct 53519 ATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTC 53460
Query 76561 ATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGG 76620
|| || ||||| | | ||| || | | | || || | |||||||||||| ||
Sbjct 53459 GTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 53400
Query 76621 TATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTT 76680
||||| ||||| || | ||| || | | | |||||| ||||| |||||
Sbjct 53399 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 53340
Query 76681 AAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACC 76740
||| || | ||||| ||| | || | ||||| || || || || || || | | ||||
Sbjct 53339 AAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACC 53280
Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800
|| || || || || ||||| || | || | |||||||| || || |||| | |||
Sbjct 53279 TGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCAT 53220
Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860
||| | || ||||| ||||| || ||||| || ||| || || || | ||
Sbjct 53219 TGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGAT 53160
Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920
|| || | || || || || || || | || ||||| | ||||| || |
Sbjct 53159 GTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 53100
Query 76921 TGTGTCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGAAGAAAACAGCTAG 76976
|| || ||||| || || || || |||||| ||||| |||||| | |||||
Sbjct 53099 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 53040
Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036
|| || || || ||| | || | ||| || || ||||| ||||| | |
Sbjct 53039 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 52984
Query 77037 TTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095
| || | |||| || ||||| || || ||||||| || || ||||| ||
Sbjct 52983 TCAACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCG 52925
Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAAC 77155
||||| |||||||| | ||| || || |||| || || ||| || ||| | |
Sbjct 52924 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGA 52865
Query 77156 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAA 77215
| ||||||| |||| ||| || || || || || | ||| ||||| | || ||
Sbjct 52864 AGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAG 52805
Query 77216 ATAATAACCGAATTTAG 77232
| ||| |||| || ||
Sbjct 52804 ACAATGGCCGAGTTCAG 52788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712929783749760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |