Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236645.1_202017-07-
28] 518 sequences; 31,898,548 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq110 161 2e-34
seq443 120 6e-22
seq98 116 8e-21
seq474 113 9e-20
seq497 105 1e-17
>seq110
Length=1282662
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| || | ||| || || |||||||||||||| | |
Sbjct 75895 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 75836
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 75835 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 75776
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||||||||||||||||| || ||| | ||||| ||||| || | ||| |||
Sbjct 75775 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 75716
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| || |||||
Sbjct 75715 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 75669
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| |||| || | || |||||| |||||||||||||| |
Sbjct 75668 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 75609
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || |||||||| || || || || ||||| |||| || || |||||| ||
Sbjct 75608 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 75549
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| | || || | ||||| ||||| | |||||
Sbjct 75548 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGAC 75489
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 75488 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 75441
Score = 147 bits (162), Expect = 5e-30
Identities = 157/205 (77%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || ||||| | ||||| || || |||||||||||||| |
Sbjct 75440 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 75381
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || ||||| || ||||| ||||| ||||| |||||| ||
Sbjct 75380 CAGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGG 75321
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || |||||||| |||||| ||||| || || | ||||| ||||| || | || |
Sbjct 75320 AATGCCTTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAA 75262
Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075
| ||||| || || ||||| || ||
Sbjct 75261 CCTCGAGGGTAATGGTCTTGCCGGT 75237
>seq443
Length=1028484
Score = 120 bits (132), Expect = 6e-22
Identities = 136/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || ||||| |||||||| | || || || || ||||||
Sbjct 778397 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 778456
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030
||||| || ||||| || || ||||||||||| |||||| ||||| || || | ||
Sbjct 778457 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 778515
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| ||||| | ||||| ||||| ||||| ||||| || || | ||||| |||||
Sbjct 778516 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 778575
>seq98
Length=491243
Score = 116 bits (128), Expect = 8e-21
Identities = 111/141 (79%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | ||||| || || || ||||||||||| |
Sbjct 403775 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 403834
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| |||||||| || || ||||| ||
Sbjct 403835 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 403894
Query 282992 AATACCCTCCTTGTCT-TGGA 283011
||| |||||||||||| ||||
Sbjct 403895 AATTCCCTCCTTGTCTGTGGA 403915
>seq474
Length=994170
Score = 113 bits (124), Expect = 9e-20
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| ||| ||| | || ||||| |||| ||||||
Sbjct 270704 AGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGT 270645
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
||||| || |||||||| || ||||| | | |||| || || || |||| | |
Sbjct 270644 CACAATACATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCT 270585
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||| ||| |||||||||| || |||||| |||||| || || || || ||||
Sbjct 270584 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACT 270525
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||| |||||||| |||| || || | | | |||||
Sbjct 270524 TCTTCGAGAAGCGTGTTGGCGAATACCAGAAGGCTGGTGT 270485
>seq497
Length=99371
Score = 105 bits (116), Expect = 1e-17
Identities = 250/377 (66%), Gaps = 3/377 (1%)
Strand=Plus/Plus
Query 312486 CGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATCG 312545
|| |||||| | | | | ||||| || || |||||| |||| || | || ||| |||
Sbjct 78098 CGTCCCCACATCAAAGCCTTGACGATCGAGGCGAAGTTGTCGTCCATCAAAATGATGTCG 78157
Query 312546 GCTGCTTCCTTTGCAATGTCTGTAC---CACTCCCCATTGCACACCCGACGTCTGCTTCC 312602
| ||||||||||| | ||||||| || | ||| ||| ||||||| || || ||
Sbjct 78158 GAGGCTTCCTTTGCGACTTCTGTACCAGCAATATTCATGGCAAACCCGACATCAGCAGCC 78217
Query 312603 TTAAGAGCCGGGGCGTCGTTAGCACCATCGCCACTCGATGCGACGACGTGGCCAAGGGCC 312662
|| || || || |||||||| | |||||| ||| | |||||| | ||| | |
Sbjct 78218 TTTAGGGCAGGAGCGTCGTTGGTACCATCTCCAGTGACAGCGACGGTCTCGCCCATCTCT 78277
Query 312663 TTCATGAGCTGAACCAACTTATACTTATCCTCTGGGGATGAACGGGCAAGAACTTTCAGC 312722
|||| | ||| ||||| | | ||| || || || || || || || ||||| | |||
Sbjct 78278 TTCAGGCGCTTGACCAAGGTCTTCTTGTCGTCGGGAGAAGATCGCGCGAGAACCTGCAGT 78337
Query 312723 TTAGGTGCGATGGCAACCTGTTCATCGTTACTCATTGCCCGGAATTCCTTACCTTCAATG 312782
|| || ||| || ||| ||| || ||||| ||||||||| ||||| |
Sbjct 78338 TTTGGAATGATAGCCTTCTGCTCAGTCTTGCTCATCTTGCGGAATTCCGGTCCTTCGAGT 78397
Query 312783 GCGATATCCCCGTGCTTCAGCATACCGATTTCACTGGCAATGTGCTTCGCCGTCTGGATG 312842
|| | | | || | | | || || || | ||||| ||| |||||| | |||
Sbjct 78398 GCAACACCACCTGGGGTGAAGATGCCACACTCGGTAGCAATAGCCTTTGCCGTCAGAATG 78457
Query 312843 TTATCACCGGTAACCAT 312859
|| || || ||||||||
Sbjct 78458 TTGTCTCCAGTAACCAT 78474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046732252922772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |