Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq122 109 5e-19
seq255 93.3 4e-14
>seq122
Length=596269
Score = 109 bits (120), Expect = 5e-19
Identities = 383/583 (66%), Gaps = 19/583 (3%)
Strand=Plus/Plus
Query 153732 TGATTGCTTTTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCT 153791
|||||||| |||||||| ||||||||||| || ||| | ||||||||||| ||||
Sbjct 542124 TGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTC 542183
Query 153792 TGAATTTCTATAATAG--TACGCATCAATG-TGACCGCGGGCATTTGATCGCGAAACTGG 153848
|| || | ||||| ||| ||| | ||| | || | | || || || |
Sbjct 542184 TGCGCCTCGAGAATAGCATAC-CATATTTTCTGAGCACGAACCGTC--TCACGGCCCTTG 542240
Query 153849 CCCTTGTCT-TCGTAGTGTTTGTACCAGTATTCAAACTCATCACC--AAACGTATTGTTA 153905
|| || ||| || || | | |||| | | ||||| ||||| |||| ||
Sbjct 542241 CC-TTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAAC--ATCCGAC 542297
Query 153906 AGCTCGGGACATTCGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGC 153965
|| | || ||||||||||| |||||||| | ||| ||| || | || || || ||
Sbjct 542298 AGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGC 542357
Query 153966 ATAAATATATCGGGAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTG 154025
||||| | |||||||| ||| || |||| | || |||||||| ||||| |
Sbjct 542358 ATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTT 542417
Query 154026 CCAATGTTTCGACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAA 154085
||| ||| || | || | || | ||| | ||| ||||||||| || | |||
Sbjct 542418 CCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAG 542477
Query 154086 ACTGCTTGAGCGCCTTTACGC---TTGCCGCCCTGATTTACGTGACGCACCATATTGTTG 154142
| || ||| ||| |||| ||||| ||||| | |||| ||| | | |||||
Sbjct 542478 ATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTA 542537
Query 154143 AAAACCCGAAGCATGGGTAGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCT-TGCT 154201
| || || ||||| |||| |||||| ||| || |||||||| ||| | ||
Sbjct 542538 TAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAG 542597
Query 154202 GTTGCGGCCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCAT 154261
|| |||| | | | ||| || | | ||||||||||| ||| |||||||||||
Sbjct 542598 CCTGTGGCC-CTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCAT 542656
Query 154262 GGCGCA-ATCGTTCAATGTGTTATAGATACCACGAATGCTATC 154303
||| || ||| || | || | ||||||||| |||||| ||
Sbjct 542657 GGCACATATC-TTGAGGGTATCGTAGATACCATCAATGCTGTC 542698
>seq255
Length=1030235
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
||||| || || | ||||| || ||||| | || ||||| || || ||||| |||||
Sbjct 662211 TGGCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCC 662270
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| ||| | ||| || ||||| || || || |||| ||||| ||||| || ||
Sbjct 662271 GAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGT 662330
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| ||||| || ||||| ||| ||| || | | || | ||||||| | |||
Sbjct 662331 GGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCC 662390
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||||||||| | || || ||||| |||||||||
Sbjct 662391 ACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCATA 662441
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || ||||| | || || ||||| || ||||| || ||| |
Sbjct 662442 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 662501
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | || |||||||| || || ||| | ||||| || ||||| || || ||
Sbjct 662502 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 662561
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || || | | || | |||||| ||| ||| |||
Sbjct 662562 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 662621
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | ||||||||||| | || || ||||| || ||||||
Sbjct 662622 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATA 662669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062418796000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |