Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07- 28] 255 sequences; 30,221,182 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq177 95.1 1e-14 >seq177 Length=464056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 347/539 (64%), Gaps = 7/539 (1%) Strand=Plus/Minus Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||||| | || || ||||| || ||||| | || | ||| | || ||||| Sbjct 196260 GCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTT 196201 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 || | ||| || || |||||||| || || || ||||| || |||||||| || ||||| Sbjct 196200 CTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 196141 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || || | || | || | | || |||| || |||||| ||||| || Sbjct 196140 TGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTC 196081 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCT-CTT 14130 || || | || | || | || || ||||| || | ||| || ||| Sbjct 196080 AGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTT 196021 Query 14131 TAGTACT-TGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189 | | | ||| |||||||||| || || | | ||| | || ||||| ||||| ||| Sbjct 196020 TGGCTCGCTGA--TGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCC 195963 Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249 || ||||| || || || ||||||| || |||| || || || ||| || Sbjct 195962 ATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAG 195903 Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14309 | ||| | | || || || || || ||||| || || || ||||| | | || | Sbjct 195902 CGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGT 195843 Query 14310 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTTAGAA 14366 || ||| || | || || | ||||||| || ||||| ||| | |||||| || Sbjct 195842 GAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTCGAC 195783 Query 14367 AGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 ||||| | || ||| ||||||| || || | || ||||| |||||| |||||| Sbjct 195782 AGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 195724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726470867000