Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq177 232 1e-55
seq122 165 1e-35
>seq177
Length=464056
Score = 232 bits (256), Expect = 1e-55
Identities = 579/864 (67%), Gaps = 33/864 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| ||||||| || ||||| | || ||| | ||||||
Sbjct 195724 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 195783
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | || | | || || ||| || || ||
Sbjct 195784 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 195843
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || ||||| |||| |||||||| || |||||||| || || || || ||
Sbjct 195844 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 195902
Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| ||| ||| || || || |||| ||||| ||||| ||||| |||||||
Sbjct 195903 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 195961
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | ||||| || | || || || || || | ||||| |||| ||
Sbjct 195962 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 196021
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| || |||| | || || || || ||||||| | || | || || | ||||
Sbjct 196022 AGCAGCG--AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 196078
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | | || ||||| |||| | || || | | |||| | | || | |
Sbjct 196079 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 196138
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
|||| |||||||| ||||| |||||||| || || |||||| || ||||| ||||| |
Sbjct 196139 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 196198
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||| || || |||||| |||| || || | |||||| | || || || || ||||
Sbjct 196199 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 196258
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| ||||| ||| || ||||| |||| ||||| | | || ||
Sbjct 196259 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 196312
Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670
|||| | || || ||||| | ||||| ||||| | ||| || || ||||
Sbjct 196313 ACCAGGCCCTTGTGCAGAGCATCA------TCACCGAGGCCGTCACGATCGAGCAGGAGT 196366
Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729
| | || || | || || || | | || |||||| || | || |||| |
Sbjct 196367 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 196425
Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786
||||| || || || || ||||| ||||||| | | ||| ||||| | |||
Sbjct 196426 TACATTGAATTCGTCGCCGATCGCCTACTGTTAG---CACTCGGCAACAAGAAGTTCTAC 196482
Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846
||||||| || ||||| || |||||| | ||| || || | || |||||||||||
Sbjct 196483 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 196542
Query 125847 TTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||| || ||||||||
Sbjct 196543 TTCGAGAAGCGTGTTGGCGAGTAC 196566
>seq122
Length=596269
Score = 165 bits (182), Expect = 1e-35
Identities = 382/568 (67%), Gaps = 6/568 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||||| ||| || || || |||||||| || | || || || || | ||
Sbjct 542581 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTG-CTCG 542523
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || ||
Sbjct 542522 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 542463
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||| || ||||| | | || || || | ||||| ||| ||| ||||| | ||
Sbjct 542462 GCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 542403
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || ||||| || || |||||| | || ||| | || ||| |||| ||| | |
Sbjct 542402 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 542343
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||| || ||||||||| || | || |||||||| ||| | ||
Sbjct 542342 GAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTTACGG 542283
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||| ||| ||| | |||||||||
Sbjct 542282 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 542223
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
||| ||| | || | ||| | || || | ||| ||| ||||| || || || |
Sbjct 542222 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 542164
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283
|||||| |||||||| ||| || ||||| ||||| || | | ||||| |||||||
Sbjct 542163 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGG-CACCATC 542105
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
||| |||| ||| ||||||| || || | |||||| | |||| || ||| || ||
Sbjct 542104 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTC 542045
Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371
||| |||||| ||| | ||||||||
Sbjct 542044 TGCAATCTGGCTTCGCTTGCTCTGCCCA 542017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056837873800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |