Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07- 28] 255 sequences; 30,221,182 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq177 172 6e-38 >seq177 Length=464056 Score = 172 bits (190), Expect = 6e-38 Identities = 487/732 (67%), Gaps = 21/732 (3%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 ||| || || ||||| ||||| || ||||| | || ||||| || ||||| | | | Sbjct 196446 ATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-CTTGC 196388 Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 | || |||||||| |||||||| || | |||||| ||||| || | | ||| || Sbjct 196387 ATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG-CTC 196329 Query 93045 TTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGT 93101 | | | | |||| | || || | | | || | ||| | ||| || |||| Sbjct 196328 TG-CACAAGGGCCTGGTTCGGCTTGTTCTTC-AGATGCGAGAACAGAAGGCAGGCGAAGT 196271 Query 93102 CGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161 | || || | || || || || || || | ||| || |||||| | || | | | Sbjct 196270 CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGA 196211 Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221 | || |||||||| ||||| || || | ||||||| ||||| || || ||||| || | Sbjct 196210 GACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCAA 196151 Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-CTGA--TCCATT 93278 |||| |||||||| | | ||| ||| || || || || || | || ||||| Sbjct 196150 CGGCGGCAAATGCAATGAGACGGAGGGCGAA---TGTCGAGTTCTTGTCAGAAATCCATC 196094 Query 93279 TTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAATAGG 93337 || ||||| || || || | || || || | |||| ||||| || || || ||| Sbjct 196093 GCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGA-TGTTGTCGATGGCATTGAACAGG 196035 Query 93338 TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAA 93397 || ||||| | | || | |||||||||||||| | || ||||| | || || Sbjct 196034 TATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAG 195975 Query 93398 TGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACT 93457 |||| |||||||| || ||||| |||||||| |||| || |||| ||||||||| Sbjct 195974 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACC 195915 Query 93458 TCTTGAGAA-AATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516 || ||| || | ||| ||||| || || ||||| || ||||||||||| || || || Sbjct 195914 TCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAA 195856 Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGA 93573 || | | || || || | || || || || | |||| | ||| ||| Sbjct 195855 TGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTG 195796 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 ||||| || || ||||| | || || | ||||| || || || || || |||||||| Sbjct 195795 GAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTA 195736 Query 93634 CATATCCCATAT 93645 ||| | |||||| Sbjct 195735 CATTTGCCATAT 195724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859025006200