Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq111 102 2e-16
seq179 98.7 2e-15
>seq111
Length=1775037
Score = 102 bits (112), Expect = 2e-16
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| || |||||||| || |||||||| || |||| ||||||
Sbjct 960397 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 960456
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | || || |||| || ||| | |||| ||||| || || ||
Sbjct 960457 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTCTACCAGCACGAGAACATCCGTATCGC 960515
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||||| |||| || || | ||| || | |
Sbjct 960516 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 960575
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 960576 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 960626
Score = 96.9 bits (106), Expect = 7e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| | ||||||| ||||| |||||||| || |
Sbjct 960953 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGCATGAAGGGTCTTTCCGGCG 961012
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | || ||| ||| |||| |||||| | |||||| ||||||||
Sbjct 961013 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 961071
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|| |||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 961072 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 961118
Score = 87.8 bits (96), Expect = 4e-12
Identities = 103/137 (75%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 279703 CTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC- 279761
||||||| |||||||||||||||||||| || ||| |||||||| || | | |||
Sbjct 959942 CTCTGTCCGGTGGTTGGAAGATGAAGCTTGCGCTCGCTCGCGCCGTT-TTCGAAAAGCCA 960000
Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821
|| |||| ||||| || ||||| || || ||| ||||| || |||||| |||||
Sbjct 960001 GACATCCTTCTGCTCGACGAGCCGACGAATCACTTGGACGTCAAGAACGTAAAGTGGCTC 960060
Query 279822 GTGTCCTACCTAACCAG 279838
| | |||||| |||||
Sbjct 960061 GAGGACTACCTCACCAG 960077
>seq179
Length=1674876
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| |
Sbjct 1473766 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 1473707
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| || || || ||| ||||||||| |||| || | ||| || ||||
Sbjct 1473706 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 1473647
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| || | ||| | |||| || || || | ||| || ||||| ||| |||||||||
Sbjct 1473646 ACGCGCTCGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 1473587
Query 280354 GCTATGC 280360
| |||||
Sbjct 1473586 GATATGC 1473580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027833441864455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |