Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq177 123 2e-23
seq255 96.9 3e-15
>seq177
Length=464056
Score = 123 bits (136), Expect = 2e-23
Identities = 174/239 (73%), Gaps = 4/239 (2%)
Strand=Plus/Plus
Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
|||||| ||| ||||| || | ||||| ||||||| || || | ||| || ||
Sbjct 196329 GAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATG 196388
Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720
| |||| ||||| |||||||| ||||| | ||||| || || || || |||||
Sbjct 196389 CAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCG 196448
Query 52721 TCTGTTGGT-GCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTT 52778
|| || | ||| ||||| || | | |||| || |||||| ||| || || || ||
Sbjct 196449 CCTACTGTTAGCA-CTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTC 196506
Query 52779 ATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| | ||||||||||| | |||||||||||||| ||||||||||| || ||||||||
Sbjct 196507 ATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 196565
>seq255
Length=1030235
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| || || || |||||||||||| || |||||| |||||||| || || || | |
Sbjct 662475 GATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCA 662534
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||| || || ||||| || ||||| ||| || || | |
Sbjct 662535 AAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACA 662594
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| | ||||| ||||||| || | || || || || ||||| ||
Sbjct 662595 TTG-TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 662653
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 662654 GACGAAGATCTGCAT 662668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260818163600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |