Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07- 28] 255 sequences; 30,221,182 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq255 145 9e-30 seq111 127 2e-24 seq110 107 2e-18 >seq255 Length=1030235 Score = 145 bits (160), Expect = 9e-30 Identities = 174/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 |||| |||||| | | ||||| ||||| |||| || |||||| ||||| ||||| Sbjct 662208 TATTGGCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAA 662267 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 || || || || || |||| || ||||||||||||||||| || | ||||||||||| Sbjct 662268 TCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCC 662327 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539 | || | || ||||||||| |||||| ||||| ||| | | | ||||||| || Sbjct 662328 GGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGA 662386 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || | |||||||| ||||| || || || || || || |||||||| Sbjct 662387 TTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 662440 Score = 132 bits (146), Expect = 5e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||||||||| ||||| || | || |||||||||||||| || || Sbjct 662478 TCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAA 662537 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||| | || | | |||||||||| ||||||| ||||| | Sbjct 662538 ATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTG 662597 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||||| || || || || | |||||||| ||||| || || || || || Sbjct 662598 TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 662657 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 662658 AAGATCTGCAT 662668 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | || |||||||| || || ||||||||||| || ||||| |||| ||| Sbjct 662688 ACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 662747 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| |||||||| |||||||| | || | || ||||| ||| | Sbjct 662748 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 662807 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||| | | | | |||||| ||| || || || | || ||||| ||| Sbjct 662808 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 662867 Query 46565 CCCGT 46569 || || Sbjct 662868 CCGGT 662872 >seq111 Length=1775037 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || ||||| | || || | |||||| || ||||| | Sbjct 733914 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 733855 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | | |||||||||| |||||| |||||| | Sbjct 733854 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 733795 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||||||||| || || || | ||||||||| ||||| || || || || || | Sbjct 733794 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 733735 Query 46584 AGATTTGC 46591 || | ||| Sbjct 733734 AGCTGTGC 733727 >seq110 Length=596651 Score = 107 bits (118), Expect = 2e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| || || ||||||||||| || ||||| | || ||||||||||||||| Sbjct 202976 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 202917 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| ||||||||||||||||| | || | | ||||||||| Sbjct 202916 GCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 202873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236598302600