Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq111 268 1e-66
seq22 123 3e-23
seq184 109 7e-19
>seq111
Length=1775037
Score = 268 bits (296), Expect = 1e-66
Identities = 484/702 (69%), Gaps = 8/702 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || || |||||
Sbjct 1422253 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAAATACCC 1422312
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||||| | | || ||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 1422313 TCCTCAATTGTGAGCAGCGATACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 1422372
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 1422373 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTCGGCTCG 1422432
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695
|| || ||||| || ||| ||||||||||| | ||| || || || || ||||||||
Sbjct 1422433 TTGATGATACGGAGGACGTTGAGGCCAGCAAT-GAGGCCGGCGTCCTTGGTTGCTTGTCG 1422491
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| ||||| || || || || ||||| ||||| |||| |||| | ||| ||
Sbjct 1422492 CTGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAG 1422551
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
||||| || ||| | || ||| || || |||| ||| | || ||||| || | |
Sbjct 1422552 GTACGACTCTGCGGTCTCACGCATCTTTGTGAGAATCATGGCGGAGATCTCCTCTGGTGT 1422611
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875
||||| ||| || || || || || || || | || || ||| ||
Sbjct 1422612 GAACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT-GCCG--GCCTTCTC 1422668
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
||| ||||| | | | | |||||||| |||| |||| | ||| ||||| |
Sbjct 1422669 GATGACCTTGAAGGGAAAGTGCTTCATATCTGCTTGCACCTCTGCGTCTTGGAACTTGCG 1422728
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
||||| | |||||||| || || ||||||||| ||||||||||| ||||||||
Sbjct 1422729 GCCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGGTTCTT 1422788
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
|| || || ||||| ||||| || | || || || |||||| | || || || ||
Sbjct 1422789 GGCAGCATCACCGATTAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGT 1422845
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
|| || || || ||||| || || || || | ||| || | | ||| || |||||
Sbjct 1422846 GCGGTTGCCCTGATCGTTGGCGATGATCTCGATGCGATCATCTCTGAAGATACCCACGCA 1422905
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| ||||| || || || || |||||||||||| | | |||
Sbjct 1422906 GGAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 1422947
Score = 129 bits (142), Expect = 7e-25
Identities = 258/381 (68%), Gaps = 1/381 (0%)
Strand=Plus/Plus
Query 7014 CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072
||| |||| ||||| || ||||| | || ||||| || || ||||| || ||||| ||
Sbjct 1420316 CCGCTAAGGATGGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCGTCTGGGTTGATA 1420375
Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132
| | | || | || || ||||| || | || || | ||| | || || || |||||
Sbjct 1420376 GATCTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATA 1420435
Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192
|| || || || ||||| | ||||| || | || || || |||||||| | ||
Sbjct 1420436 CGAGTGGAACCGCCGACAAGGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCATCG 1420495
Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCA 7252
|| || || || || || ||||| |||||| | |||| || || || ||
Sbjct 1420496 CGGAGAGTGCGCTCCACGGGCTCCATGGTGGAACGGAAAAGGTCCTGGCAAAGCTCTTCG 1420555
Query 7253 AAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCA 7312
|| || ||||| || ||||| || ||||| || | ||| ||||| | ||| || || ||
Sbjct 1420556 AAGCGAGCACGCGTGATGGAAGTGTAGAAGTCGATGCCCTCGTAGAGCGAGTCGATCTCG 1420615
Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372
|| | || ||||| | || | || ||||| ||||| || || || || || | |
Sbjct 1420616 ATAGAAGTCTGTGCGCTGCTGGAGAGGGTGCGCTTCGCGCGTTCGCATGCTGTCCGCAGA 1420675
Query 7373 CGACGAAGGGCACGCGGGTTA 7393
||||||||||| || | ||||
Sbjct 1420676 CGACGAAGGGCGCGGGCGTTA 1420696
>seq22
Length=847090
Score = 123 bits (136), Expect = 3e-23
Identities = 209/302 (69%), Gaps = 3/302 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| | ||||||||| || || || || ||||| || ||||| |||| |||
Sbjct 825834 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 825893
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | ||||| | | || ||||| || ||||||||||| || || | ||||| |||
Sbjct 825894 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 825953
Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|| || | ||| ||| ||||||| || |||||||| || || |||||
Sbjct 825954 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 826013
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || || || || ||| ||| || || || || | | || || || || ||||||
Sbjct 826014 TCGTTGATGATGCGGAGAACGTTGAGTCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGT 826073
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || |||||| ||||| || ||||| || | ||| || | | ||| ||||| |||
Sbjct 826074 CTCTGGTTATCGTTGAAGTAAGCTGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 826133
Query 7754 AG 7755
||
Sbjct 826134 AG 826135
>seq184
Length=330706
Score = 109 bits (120), Expect = 7e-19
Identities = 240/356 (67%), Gaps = 9/356 (3%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | || || || || || || || | || || || | |||
Sbjct 200278 TCGAAGTCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACACCC 200219
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573
|| | | || | || ||||| || ||||||||||| ||||| | |||||
Sbjct 200218 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCGAGGTCGTAGACAATGA-- 200161
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| ||| || | ||| | |||| ||||| ||||| |||| ||| || || || |||
Sbjct 200160 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 200105
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | | ||| || ||| || || || || || | || || || || ||
Sbjct 200104 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 200045
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| ||||| || ||||| |||| ||||| || | |||
Sbjct 200044 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 199985
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || |||| || ||||| ||| || | ||| ||||| | ||||||
Sbjct 199984 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 199929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635130775514200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |