Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq122 268 1e-66
seq177 111 2e-19
seq190 109 7e-19
>seq122
Length=596269
Score = 268 bits (296), Expect = 1e-66
Identities = 905/1386 (65%), Gaps = 35/1386 (3%)
Strand=Plus/Minus
Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680
||| ||||||| || || |||| || ||||||||||| ||||| | | | ||||||
Sbjct 542866 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 542807
Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739
||| || | ||||| | ||| |||| || || | ||||| || |||| |||||
Sbjct 542806 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 542748
Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796
||| ||| || | | | | ||| || ||| | | || | ||||| || ||
Sbjct 542747 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 542691
Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856
|||| || |||| || |||| ||||||| ||||| ||| ||||| |||||
Sbjct 542690 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 542631
Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914
|| | || | || | |||| |||| || ||| || || | || ||||| ||
Sbjct 542630 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 542573
Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974
||| | ||| || | |||||||| || || | |||| ||| || || || || ||
Sbjct 542572 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 542513
Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028
|| | ||| ||||| || | | || | || |||| |||||||| ||||| ||
Sbjct 542512 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 542456
Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 542455 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 542397
Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 542396 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 542337
Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206
|| |||| |||| | || || || || || || ||||| || |||| ||||| |
Sbjct 542336 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 542278
Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266
|||| | | || ||| || ||| |||| | || || |||||| | |
Sbjct 542277 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 542218
Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326
|| | | ||| | ||||||||| || | || |||||||| || ||||| | || |
Sbjct 542217 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 542158
Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386
| ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| |
Sbjct 542157 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 542098
Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446
| || | || || || ||| |||| | | | ||||||| ||||| || || |
Sbjct 542097 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 542038
Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 542037 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 541978
Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566
|||| ||||| || || ||| |||||| ||||| |||| || || | || |
Sbjct 541977 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 541918
Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 541917 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 541859
Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684
||| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 541858 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 541800
Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744
||||| | ||| | || |||||||| || ||||| || ||||||||||| |
Sbjct 541799 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 541740
Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
||| | || ||| ||||| || || || | || ||||||| || || ||
Sbjct 541739 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 541680
Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861
| ||| || | || ||||||| ||| | ||| | || || ||||||| |||
Sbjct 541679 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 541623
Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921
||||||| ||| || | ||| | || ||| ||| | | || || |||||
Sbjct 541622 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 541563
Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981
||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | ||
Sbjct 541562 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 541503
Query 112982 CATCTA 112987
||| ||
Sbjct 541502 CATTTA 541497
>seq177
Length=464056
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241
|| ||| | |||||||| ||||||||||||||||||||||| | ||| ||| |||||
Sbjct 196129 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 196187
Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 196188 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 196247
Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| ||||| | ||| ||| || ||
Sbjct 196248 CCGTGATGAGGGCATGCACACAGACTTCGC 196277
>seq190
Length=1563660
Score = 109 bits (120), Expect = 7e-19
Identities = 224/325 (69%), Gaps = 10/325 (3%)
Strand=Plus/Plus
Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 80161 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 80220
Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849
|| |||| | | |||| |||||||| ||||| |||||||| | ||||||||
Sbjct 80221 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 80279
Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908
| || |||| ||| ||| || | ||| || || ||||| || ||||| |
Sbjct 80280 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 80337
Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968
||| || ||||| ||||||||||| | | || | || |||| | || |||
Sbjct 80338 ATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCA 80397
Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028
| || ||| ||||| ||||| ||||||| |||||| || |||||| || ||
Sbjct 80398 AGAGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTG--TGACCGT 80455
Query 177029 GC--CGTACCCGCCTTGTTCGCATC 177051
| |||||| |||||||| || ||
Sbjct 80456 CCTTCGTACCGGCCTTGTTGGCGTC 80480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620740421383600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |