Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07- 28] 255 sequences; 30,221,182 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq122 268 1e-66 seq177 111 2e-19 seq190 109 7e-19 >seq122 Length=596269 Score = 268 bits (296), Expect = 1e-66 Identities = 905/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Minus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || |||| || ||||||||||| ||||| | | | |||||| Sbjct 542866 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 542807 Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || | ||||| | ||| |||| || || | ||||| || |||| ||||| Sbjct 542806 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 542748 Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796 ||| ||| || | | | | ||| || ||| | | || | ||||| || || Sbjct 542747 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 542691 Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856 |||| || |||| || |||| ||||||| ||||| ||| ||||| ||||| Sbjct 542690 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 542631 Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914 || | || | || | |||| |||| || ||| || || | || ||||| || Sbjct 542630 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 542573 Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974 ||| | ||| || | |||||||| || || | |||| ||| || || || || || Sbjct 542572 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 542513 Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028 || | ||| ||||| || | | || | || |||| |||||||| ||||| || Sbjct 542512 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 542456 Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 542455 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 542397 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 542396 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 542337 Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 || |||| |||| | || || || || || || ||||| || |||| ||||| | Sbjct 542336 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 542278 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266 |||| | | || ||| || ||| |||| | || || |||||| | | Sbjct 542277 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 542218 Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 || | | ||| | ||||||||| || | || |||||||| || ||||| | || | Sbjct 542217 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 542158 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 542157 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 542098 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 | || | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 542097 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 542038 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 542037 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 541978 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 |||| ||||| || || ||| |||||| ||||| |||| || || | || | Sbjct 541977 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 541918 Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 541917 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 541859 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684 ||| | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 541858 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 541800 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||||| | ||| | || |||||||| || ||||| || ||||||||||| | Sbjct 541799 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 541740 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 ||| | || ||| ||||| || || || | || ||||||| || || || Sbjct 541739 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 541680 Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861 | ||| || | || ||||||| ||| | ||| | || || ||||||| ||| Sbjct 541679 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 541623 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 ||||||| ||| || | ||| | || ||| ||| | | || || ||||| Sbjct 541622 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 541563 Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981 ||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | || Sbjct 541562 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 541503 Query 112982 CATCTA 112987 ||| || Sbjct 541502 CATTTA 541497 >seq177 Length=464056 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 196129 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 196187 Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 196188 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 196247 Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| | ||| ||| || || Sbjct 196248 CCGTGATGAGGGCATGCACACAGACTTCGC 196277 >seq190 Length=1563660 Score = 109 bits (120), Expect = 7e-19 Identities = 224/325 (69%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 80161 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 80220 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 80221 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 80279 Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908 | || |||| ||| ||| || | ||| || || ||||| || ||||| | Sbjct 80280 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 80337 Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968 ||| || ||||| ||||||||||| | | || | || |||| | || ||| Sbjct 80338 ATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCA 80397 Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028 | || ||| ||||| ||||| ||||||| |||||| || |||||| || || Sbjct 80398 AGAGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTG--TGACCGT 80455 Query 177029 GC--CGTACCCGCCTTGTTCGCATC 177051 | |||||| |||||||| || || Sbjct 80456 CCTTCGTACCGGCCTTGTTGGCGTC 80480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740421383600