Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq122 145 9e-30
>seq122
Length=596269
Score = 145 bits (160), Expect = 9e-30
Identities = 1077/1718 (63%), Gaps = 55/1718 (3%)
Strand=Plus/Plus
Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTG 109565
||||||||| ||||| || |||||| ||||| ||||| | ||||| ||| || |
Sbjct 541253 CTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCT---G 541309
Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625
||| || |||||||| |||||||| | ||||| || || ||||||| ||||
Sbjct 541310 GCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCG 541369
Query 109626 TTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682
||||| |||||| |||| | | || | | |||||| | | |||||||| ||
Sbjct 541370 CTGAATGGAGCCATTGTCAGCGATGA---TGCGGTTCTTCATGTTCTCTGACCAGAGGCC 541426
Query 109683 GACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740
| |||||| | | ||| ||| |||||| || || || ||||| |
Sbjct 541427 ACGGTCGACGAGATCCTTCAGAAGCCATGG--GTTGACGACCTGGAACTCGCCAGCCAAC 541484
Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800
|| || ||| ||||| | ||||| || ||||| ||||| || ||| | |||
Sbjct 541485 ACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATC 541544
Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC--G 109858
|| | || || ||||| ||||| || || | |||||| ||| || | ||| | | |
Sbjct 541545 TGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGG 541604
Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918
| | | || | | | |||| |||| || | | | || ||||| ||
Sbjct 541605 GCGAT-CTTGCCCTTG-AGTGCGGCCCAGTCCCAGAGGTCGGTAGG---AGTCTTGCC-- 541657
Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978
|||||| || || || | |||| | | ||||| || | | ||||||| |
Sbjct 541658 -CCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAG 541716
Query 109979 ACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038
|| ||| || | |||| |||||||||| || || |||||||| || |||||||
Sbjct 541717 GACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAA 541776
Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGA 110094
|||| || ||| | | ||| ||||||| || | || | ||||
Sbjct 541777 AAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGA 541836
Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154
| |||| || ||||| | ||||| ||||||||||| || || | |||
Sbjct 541837 AGG----CATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTC 541892
Query 110155 CGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214
||| || | ||| ||||| ||||| |||||| | || || || ||
Sbjct 541893 TTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTG 541952
Query 110215 ACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACA 110274
|| || |||| || || ||||| | | | || || | |||| | | |||
Sbjct 541953 ACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACG 542012
Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334
|| |||| ||||||| || || |||||||| |||| ||| ||| | | |||
Sbjct 542013 TAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTAC 542072
Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394
|||| || || || ||||| || || ||||| ||| || | |||||||||||
Sbjct 542073 TCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTC 542132
Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454
||| |||| || ||||| || || ||| | || || || || || ||||| | || |
Sbjct 542133 TTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCG 542192
Query 110455 AGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCG 110514
||||| || | ||||| | || | || || | | ||||| |||
Sbjct 542193 AGAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCA 542252
Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT- 110573
|| ||||| |||| || || | ||||| ||||| || ||| || || ||
Sbjct 542253 TAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGA-CCAGGGCATTC 542311
Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633
|| ||| || | || | |||| | || || || || | || ||| || || || ||
Sbjct 542312 GTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 542371
Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693
|||||| | || |||| | || || |||| | ||||| | || ||||| |||
Sbjct 542372 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 542431
Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------- 110746
|| |||| || | ||||| || | ||||| || || || |||| || |
Sbjct 542432 AAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC 542491
Query 110747 TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806
|||| | ||| | | || |||||| ||| || || || ||| || |||| | |
Sbjct 542492 TGGA-CGCTT--GTTG-CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTA 542547
Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865
|||| || | || || | |||| || ||||| || | ||| | || | | ||||
Sbjct 542548 GCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCT-GTGGCC 542606
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924
| |||| ||| | ||| | ||||||||| || || ||| || ||||| ||
Sbjct 542607 CTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATC 542666
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| |||| ||| | || ||||||||||| || |||| |||| | | ||||| ||
Sbjct 542667 T-TGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGA 542725
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
| | ||| | | || || || ||| |||| ||||| || | ||||| ||| ||
Sbjct 542726 TGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGA--AG 542783
Query 111045 ACCTT--GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102
||| ||||| | ||||||||| || | || | | |||| || |||||
Sbjct 542784 TACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATG 542843
Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162
|| | || || ||||||| ||| | ||| || | ||| | ||| || |||| |
Sbjct 542844 CCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTG 542903
Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200
||||||| ||| || ||||||| || |||||
Sbjct 542904 AGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTA 542941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974122639000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |