Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq122 214 2e-50
seq177 91.5 2e-13
>seq122
Length=596269
Score = 214 bits (236), Expect = 2e-50
Identities = 890/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Minus
Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280
||| ||||||| || || ||||||| || |||||||||||||| | | | ||||||
Sbjct 542866 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 542807
Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 542806 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 542748
Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399
||| ||| ||||| | | |||||| | | |||| ||||| ||| || |
Sbjct 542747 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 542688
Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459
|||||||| | || || | | ||||| ||||| ||| ||||| ||||||||
Sbjct 542687 TGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 542628
Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517
| || | || | | || |||| | ||| || || | || ||||| || |
Sbjct 542627 TCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGCACA 542570
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| | ||| || | |||||||| || || | |||| ||| || || || || | ||
Sbjct 542569 TCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAG 542510
Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631
| || ||||| ||| | | | || ||||| | || || |||||||| ||
Sbjct 542509 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGAC 542453
Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691
||||| ||||| | || | || ||||| || | ||||| | ||| | |||
Sbjct 542452 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 542393
Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751
| || | | || |||||||| || || || ||| |||| || || || ||
Sbjct 542392 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 542333
Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810
||| |||| | || || || || || || ||||| || || | ||||| |||||
Sbjct 542332 TGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACGAGTT 542274
Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869
| | || ||| ||||| |||| ||| || ||| || ||| || | ||
Sbjct 542273 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 542215
Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929
| | ||| | ||||||||| | | ||||| ||||| || ||||| | || || |
Sbjct 542214 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 542155
Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989
||||||| || ||| ||||| || || |||||| | || || ||||||||||| |
Sbjct 542154 ACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCTCTA 542095
Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049
|| | ||||| || || | |||||| | | | |||||| ||||| |||||| |||
Sbjct 542094 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATCTGG 542035
Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109
| || | || || || | || ||| | |||| |||||| | | ||||
Sbjct 542034 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 541975
Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169
|||| || |||| || | || || || || ||| ||| || | || | |
Sbjct 541974 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 541915
Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228
| || || ||| || |||||| || | || ||| |||| |||||| | |||||
Sbjct 541914 ACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 541856
Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288
| ||||| || |||| || | |||| |||| || || ||| ||||||
Sbjct 541855 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 541796
Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348
||| | ||| | || ||||| ||||| ||||| || | || ||||| || ||
Sbjct 541795 GAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATGCGAG 541736
Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406
| ||| ||||| | ||| | || ||||||| || ||||| | || || || |
Sbjct 541735 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 541678
Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463
||| |||| || ||||||| ||| | ||| | || || ||||||| | |
Sbjct 541677 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 541621
Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523
|||||| ||| || | ||| | || ||| ||| | | || || |||||||
Sbjct 541620 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 541561
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| ||||
Sbjct 541560 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 541501
Query 76584 TCTAC 76588
| |||
Sbjct 541500 TTTAC 541496
>seq177
Length=464056
Score = 91.5 bits (100), Expect = 2e-13
Identities = 325/501 (65%), Gaps = 18/501 (4%)
Strand=Plus/Plus
Query 65025 GAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083
|||||| | ||||| || |||| ||| |||| |||| | |||||| || |
Sbjct 196074 GAAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGA-CATTCGCCCTCCGTC 196132
Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142
| |||| ||||| || ||||||||||||||||| || || || ||| ||||| |
Sbjct 196133 TCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATC-TTTTGCTGCTATCTTC 196191
Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202
||| ||||||| || ||||||||| | || || ||||| || || || || |||||
Sbjct 196192 TGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGT 196251
Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCC 65262
|||||||| | ||| || || ||| || ||| | | || || | ||
Sbjct 196252 GATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCG 196311
Query 65263 ACTACC--GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCA 65320
| ||| | | | || |||| | | ||||| || ||| ||| | | ||||
Sbjct 196312 A--ACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCT 196369
Query 65321 TCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACA 65380
| ||||| || ||||| || || | || |||||| ||| ||||| | ||||
Sbjct 196370 TGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACA 196429
Query 65381 TTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGGAA 65435
|||| | || | ||||| || || | | | || || | | | | ||
Sbjct 196430 TTGAATTCGTCGCCGATCGCCTACTGTTAGCACTCGG-----CAACAAGAAGTTCTACAA 196484
Query 65436 CGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTT 65495
||| | || || || ||||| ||||| |||||| || | || ||||||||||||||
Sbjct 196485 CGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTT 196544
Query 65496 TGAGAAGCGAGTTGGGGACTA 65516
|||||||| ||||| || ||
Sbjct 196545 CGAGAAGCGTGTTGGCGAGTA 196565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596567698434400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |