Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq66 156 7e-32
seq177 143 4e-28
seq223 118 2e-20
seq122 89.7 8e-12
seq11 86.0 1e-10
>seq66
Length=683912
Score = 156 bits (172), Expect = 7e-32
Identities = 177/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| |||
Sbjct 125573 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 125514
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| ||||||| |||||||| ||||| | ||| || |||||| || |
Sbjct 125513 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 125455
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| ||| ||| |||| ||||||||||| || |||||||
Sbjct 125454 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 125395
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| ||||| | ||||||||| || ||| ||||| ||||||||||| ||
Sbjct 125394 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 125340
>seq177
Length=464056
Score = 143 bits (158), Expect = 4e-28
Identities = 321/480 (67%), Gaps = 4/480 (1%)
Strand=Plus/Plus
Query 2018914 TCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACG 2018973
|||| || | |||||||||||||| | ||||||||||| || |||||| |
Sbjct 400301 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 400360
Query 2018974 CCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGG 2019033
|| | | |||||| | ||| |||||||||||||| || | | | |||
Sbjct 400361 CCATCGAACGCCTCAAAATCATCGCCAAAGACGGCAACATGCCACACGTAATCATCTCGG 400420
Query 2019034 GCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCG 2019093
|| |||||| | ||||| ||||| || ||||| |||||| ||||| ||||
Sbjct 400421 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCG 400480
Query 2019094 CGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCG 2019153
| ||| | | || ||||| ||||||||||| || || ||||||||||| | |||||||
Sbjct 400481 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCGGACGAGCGCGGAATCGACGTCG 400540
Query 2019154 TGCGTAGAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCA 2019211
| || | ||||| || || ||| ||||| || || || ||| || ||
Sbjct 400541 TACGAAACCGAATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGACGGGCGGCA 400598
Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271
||| | | || || ||||| || || || | || || | || |||||||| || ||
Sbjct 400599 GAAGATTGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCG 400658
Query 2019272 ATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTC 2019331
|| ||||||| |||| || |||||| || || || | || || ||| |||
Sbjct 400659 CCGAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGTAACCAATCGAA 400718
Query 2019332 GATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGA 2019391
| ||||||| | ||||| || ||||| ||||| |||| ||||| ||||||||
Sbjct 400719 CAAAATCATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCGA 400778
Score = 122 bits (134), Expect = 1e-21
Identities = 177/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| |||||||| || ||| |||||| |||||||||||||| | |
Sbjct 196582 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 196523
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || |||||| | ||| ||||||| | |||| ||||| | ||||
Sbjct 196522 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 196463
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | || ||||| |||||||||||||||||||| || |||||||| | |||||||
Sbjct 196462 GTGCTAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 196403
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | ||| || || | || | | ||||| | ||||||| ||||||||
Sbjct 196402 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 196343
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 196342 CGGTGATGAT 196333
>seq223
Length=1073682
Score = 118 bits (130), Expect = 2e-20
Identities = 104/130 (80%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||||||||||||| | || |||||| | || ||||| | || |||
Sbjct 834832 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 834891
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || |||
Sbjct 834892 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 834951
Query 2035752 ATCAAGTACG 2035761
|| || |||
Sbjct 834952 ATTCAGAACG 834961
>seq122
Length=596269
Score = 89.7 bits (98), Expect = 8e-12
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661
||||||| || || ||||| | | ||| || || | ||| |||||||| ||| |||
Sbjct 541456 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 541515
Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721
| ||| | |||| | ||||| ||||||||| |||| ||| || ||||| ||||
Sbjct 541516 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 541574
Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780
||||| ||||||||||||| |||| || | || | || || || ||| |||||||
Sbjct 541575 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 541633
Query 2069781 CCAGCGGCCG 2069790
|||| || ||
Sbjct 541634 CCAGAGGTCG 541643
>seq11
Length=895606
Score = 86.0 bits (94), Expect = 1e-10
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369
|||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| ||||
Sbjct 725956 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 725897
Query 2175370 CATAGGCGCGCATGA 2175384
||||||||||||||
Sbjct 725896 GATAGGCGCGCATGA 725882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916219274486945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |