Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07- 28] 255 sequences; 30,221,182 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq177 174 2e-37 seq122 95.1 2e-13 >seq177 Length=464056 Score = 174 bits (192), Expect = 2e-37 Identities = 357/515 (69%), Gaps = 28/515 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 195723 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 195781 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 195782 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 195838 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 195839 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 195897 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 195898 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 195957 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 195958 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 196017 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 196018 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 196074 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 196075 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 196129 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || ||| Sbjct 196130 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 196188 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 196189 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 196223 Score = 134 bits (148), Expect = 2e-25 Identities = 323/489 (66%), Gaps = 0/489 (0%) Strand=Plus/Minus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| | || ||||| ||| | |||| | ||| || || || || || | || Sbjct 400789 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 400730 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | ||| ||| || || | ||| || || ||||| || | | ||| Sbjct 400729 CGATGATTTTGTTCGATTGGTTACAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 400670 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || || || ||||| || || | | || | || || || || || || | Sbjct 400669 CCATCGTTCGGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCATCTAGAA 400610 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 | | ||||| || ||||||| || || ||| ||||| ||| | ||||| Sbjct 400609 TTACAATCTTCTGCCGCCCGTCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATTC 400550 Query 333087 TCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGT 333146 || || |||||||| | |||||||||||||| |||||||||||||| ||||| || | Sbjct 400549 GGTTTCGTACGACGTCGATTCCGCGCTCGTCCGAGGCGTTGAGTTCGAGGACGGCTTCTT 400490 Query 333147 CGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGC 333206 | ||| || || ||||| |||||| ||||| || ||||| ||||| | | Sbjct 400489 TGTAGGCTGCGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTC 400430 Query 333207 CGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGT 333266 ||||| |||| | | | || |||||||||||||| ||| | |||||| Sbjct 400429 CGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCGTCTTTGGCGATGATTTTGAGGC 400370 Query 333267 AGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGA 333326 | | || | ||||||||| ||||||||||| | | |||||||||||||| | Sbjct 400369 GTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCAA 400310 Query 333327 TCCATGGGA 333335 || |||| Sbjct 400309 CCCTAGGGA 400301 Score = 95.1 bits (104), Expect = 2e-13 Identities = 176/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| |||||||||| ||||||| | ||||| | | || | || || | Sbjct 196333 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 196392 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | || |||||||| | ||||||| || ||||||||||| |||||||| |||| Sbjct 196393 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 196450 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || || |||||| | ||||| |||| | ||||||| ||| | ||| Sbjct 196451 TACTGTTAGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 196509 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || ||||| | |||||||||||||| |||||| || | |||||||||| Sbjct 196510 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAG 196569 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 196570 AAGGCTGGTGTCA 196582 >seq122 Length=596269 Score = 95.1 bits (104), Expect = 2e-13 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 541643 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 541585 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 541584 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 541525 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 541524 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 541466 Query 263050 GTGGTCAACC 263059 || ||||||| Sbjct 541465 GTCGTCAACC 541456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177786604781310